RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 MRPL57Q9BQC6 102 aaKnown RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 SNRNP25Q9BV90 132 aaKnown RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 PCBD2Q9H0N5 130 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 PRDM12Q9H4Q4 367 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 PCDHGA6Q9Y5G7 932 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CHST10O43529 356 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 PAGE1O75459 146 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 GJB6O95452 261 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 RENP00797 406 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 CD247P20963 164 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 MRPS5P82675 430 aaKnown RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 PPP3CAQ08209 521 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 SLC20A2Q08357 652 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 MED27Q6P2C8 311 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ANKRD23Q86SG2 305 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 SLC34A3Q8N130 599 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 GJD3Q8N144 294 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ZNF567Q8N184 647 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 CERS5Q8N5B7 392 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 DENND6BQ8NEG7 585 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 GIPC3Q8TF64 312 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 TOP1MTQ969P6 601 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 AZIN2Q96A70 460 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 PNPLA2Q96AD5 504 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 SLC22A18Q96BI1 424 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 SLC25A36Q96CQ1 311 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 MARK4Q96L34 752 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 BRF2Q9HAW0 419 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 KLRF1Q9NZS2 232 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 POLR3HQ9Y535 204 aaPredicted RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 SMIM35A0A1B0GVV1 85 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 FAM172BPA6NC97 362 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 IQCF5A8MTL0 148 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 MEIS2O14770 477 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 LAMTOR5O43504 91 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 RGS10O43665 173 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 MAFO75444 373 aaPredicted RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 LINC00032P0C843 101 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 COL6A1P12109 1028 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 CCNOP22674 350 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ECHS1P30084 290 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 OR3A3P47888 321 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 OR3A2P47893 321 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ZNF143P52747 638 aaPredicted RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 BTN3A2P78410 334 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 PARP15Q460N3 678 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ARHGAP40Q5TG30 622 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 BROXQ5VW32 411 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 AAGABQ6PD74 315 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 LRRC69Q6ZNQ3 347 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ZZZ3Q8IYH5 903 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ZBTB2Q8N680 514 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 NOA1Q8NC60 698 aaKnown RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 FNIP1Q8TF40 1166 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 HAS1Q92839 578 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 TCEAL3Q969E4 200 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 POP5Q969H6 163 aaKnown RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 DNAJC19Q96DA6 116 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 C1GALT1C1Q96EU7 318 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 PTCD3Q96EY7 689 aaKnown RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 TBATAQ96M53 351 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 TSSK3Q96PN8 268 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 HAPLN3Q96S86 360 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 TMEM121BQ9BXQ6 578 aaPredicted RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 FUT8Q9BYC5 575 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 CARS2Q9HA77 564 aaKnown RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 PADI3Q9ULW8 664 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 RAI2Q9Y5P3 530 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ANKRD63C9JTQ0 380 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 CHADO15335 359 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 SCGB2A1O75556 95 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 OR4Q2P0C623 313 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 RARAP10276 462 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 PGAM2P15259 253 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 GLRA2P23416 452 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 WNT3AP56704 352 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 BNIP1Q12981 228 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 PDGFRLQ15198 375 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 IL17AQ16552 155 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.72□□□□□ -1.49
USP38-203ENST00000511739 NPNTQ6UXI9 565 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 RAB11FIP2Q7L804 512 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 CEP97Q8IW35 865 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 ARL14EPQ8N8R7 260 aaPredicted RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 PNLDC1Q8NA58 520 aaKnown RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 FAM13CQ8NE31 585 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 BHLHE22Q8NFJ8 381 aaPredicted RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 WFIKKN2Q8TEU8 576 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 SLC38A4Q969I6 547 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 PPP1R14BQ96C90 147 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 BORCS8Q96FH0 119 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 DUSP16Q9BY84 665 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 MRPS30Q9NP92 439 aaKnown RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 SPATA6Q9NWH7 488 aaPredicted RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 ZNF490Q9ULM2 529 aaPredicted RBP5.72□□□□□ -1.49
USP38-203ENST00000511739 CPQQ9Y646 472 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 GLTPD2A6NH11 291 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 FAM86B1E9PN63 330 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 H0YJX3 145 aa5.72□□□□□ -1.49
USP38-203ENST00000511739 AZIN1O14977 448 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms