RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ZBTB17Q13105 803 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 BAATQ14032 418 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZNF234Q14588 700 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZNF324BQ6AW86 544 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 TMEM211Q6ICI0 200 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 GFRALQ6UXV0 394 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZNF704Q6ZNC4 412 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZNF534Q76KX8 674 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 ARMC9Q7Z3E5 817 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 TMEM219Q86XT9 240 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 GUF1Q8N442 669 aaKnown RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 AFAP1Q8N556 730 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 GBGT1Q8N5D6 347 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZNF441Q8N8Z8 693 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 CCDC191Q8NCU4 936 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 OR52I2Q8NH67 350 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 PTPMT1Q8WUK0 201 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 TMEM255BQ8WV15 326 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 SECTM1Q8WVN6 248 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 SECISBP2LQ93073 1101 aaKnown RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 PHF21AQ96BD5 680 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 OXNAD1Q96HP4 312 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 MARK4Q96L34 752 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 MEIS3Q99687 375 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 NEURL2Q9BR09 285 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 C1QTNF4Q9BXJ3 329 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 DENND2DQ9H6A0 471 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 TMEM30AQ9NV96 361 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 SELENONQ9NZV5 590 aa3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 BCCIPQ9P287 314 aaKnown RBP eCLIP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 MARCH4Q9P2E8 410 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 TMEM184BQ9Y519 407 aaPredicted RBP3.31□□□□□ -1.88
TRAPPC11-207ENST00000511409 IGHV4OR15-8A0A075B7B6 117 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 A0A1W2PP11 408 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 DENND3A2RUS2 1198 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 OR5K3A6NET4 321 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 C4orf47A7E2U8 309 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 EIF3DO15371 548 aaKnown RBP eCLIP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 BUD23O43709 281 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 PRAMEF11O60813 436 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 WDR1O75083 606 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 FAM106CPP0CH98 169 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 HLA-DOBP13765 273 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 EEF1A1P68104 462 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 SIRPAP78324 504 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 ASIC2Q16515 512 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 SNAPC1Q16533 368 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 LETM2Q2VYF4 491 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 C9orf152Q5JTZ5 239 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 EEF1A1P5Q5VTE0 462 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 C9orf57Q5W0N0 161 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 ADALQ6DHV7 355 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 FAM171BQ6P995 826 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 PRSS57Q6UWY2 283 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 ASB18Q6ZVZ8 466 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 PLEKHM3Q6ZWE6 761 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 KRT74Q7RTS7 529 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 C16orf82Q7Z2V1 217 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 ATG9AQ7Z3C6 839 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 RBMXL3Q8N7X1 1067 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZBTB8BQ8NAP8 495 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 WDR20Q8TBZ3 569 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZFAND2BQ8WV99 257 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 SEMA4DQ92854 862 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 ERLEC1Q96DZ1 483 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 CNDP2Q96KP4 475 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 PRMT6Q96LA8 375 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 FAM81BQ96LP2 452 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 IL17FQ96PD4 163 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 DGAT2Q96PD7 388 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 DUX5Q96PT3 197 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 SERINC2Q96SA4 455 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 PPIL3Q9H2H8 161 aaKnown RBP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 GOLPH3LQ9H4A5 285 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 RETREG1Q9H6L5 497 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 CD93Q9NPY3 652 aa3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 NFKBIL1Q9UBC1 381 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC11-207ENST00000511409 CGNL1Q0VF96 1302 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 C15orf62A8K5M9 175 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 ANKRD66B4E2M5 251 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 ACOT8O14734 319 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 SSX4O60224 188 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 DIAPH2O60879 1101 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 LDB3O75112 727 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 PSMD10O75832 226 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 CSPG5O95196 566 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 PPP1R3DO95685 299 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 APOA4P06727 396 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TGFB3P10600 412 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 FGF3P11487 239 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TKTP29401 623 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 GABRA5P31644 462 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 CCKARP32238 428 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 PSMC4P43686 418 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 TERF1P54274 439 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 MLLT10P55197 1068 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 CDH13P55290 713 aa3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 EEF1A2Q05639 463 aaKnown RBP3.29□□□□□ -1.88
TRAPPC11-207ENST00000511409 COASYQ13057 564 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms