RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CFAP20Q9Y6A4 193 aaKnown RBP15.59■□□□□ 0.09
RAB40C-202ENST00000509637 UTP20O75691 2785 aaKnown RBP15.59■□□□□ 0.09
RAB40C-202ENST00000509637 NBPF19A0A087WUL8 3843 aa15.59■□□□□ 0.09
RAB40C-202ENST00000509637 SPTAN1Q13813 2472 aaKnown RBP15.58■□□□□ 0.09
RAB40C-202ENST00000509637 SGTAO43765 313 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 MTA2O94776 668 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 H2AFZP0C0S5 128 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 PECAM1P16284 738 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-202ENST00000509637 IDSP22304 550 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 FECHP22830 423 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 SEMA5AQ13591 1074 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 NADK2Q4G0N4 442 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 PDPK2PQ6A1A2 396 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 H2AFVQ71UI9 128 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 APLFQ8IW19 511 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-202ENST00000509637 BEND7Q8N7W2 519 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-202ENST00000509637 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-202ENST00000509637 SLC35G2Q8TBE7 412 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 TEKT5Q96M29 485 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 INSM2Q96T92 566 aaPredicted RBP15.58■□□□□ 0.08
RAB40C-202ENST00000509637 CHP1Q99653 195 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 GORASP1Q9BQQ3 440 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 TWSG1Q9GZX9 223 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 ACTL8Q9H568 366 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 IL17CQ9P0M4 197 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 IFNKQ9P0W0 207 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 SEC16AO15027 2179 aa15.58■□□□□ 0.08
RAB40C-202ENST00000509637 ZNF487B1APH4 448 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 RFPL1O75677 317 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 GNLYP22749 145 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 WNT3AP56704 352 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 DYNLT1P63172 113 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 DMPKQ09013 629 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 GPS2Q13227 327 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 PRKD1Q15139 912 aaPredicted RBP15.57■□□□□ 0.08
RAB40C-202ENST00000509637 SLC14A2Q15849 920 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 SLC18A3Q16572 532 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 TAZQ16635 292 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 PRR30Q53SZ7 412 aaPredicted RBP15.57■□□□□ 0.08
RAB40C-202ENST00000509637 SIRPB2Q5JXA9 342 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 PPP1R3BQ86XI6 285 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 TRAPPC5Q8IUR0 188 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 TMEM151BQ8IW70 566 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 SLC25A41Q8N5S1 370 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 LILRA3Q8N6C8 439 aaPredicted RBP15.57■□□□□ 0.08
RAB40C-202ENST00000509637 TEX19Q8NA77 164 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 AVL9Q8NBF6 648 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 CXorf40BQ96DE9 158 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 MRGPRX2Q96LB1 330 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 MLXIPLQ9NP71 852 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 PCDHB3Q9Y5E6 796 aa15.57■□□□□ 0.08
RAB40C-202ENST00000509637 OR2AG2A6NM03 316 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 MKRN2OSH3BPM6 223 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 APOL1O14791 398 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 RECKO95980 971 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 TMEM253P0C7T8 217 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 NFKB1P19838 968 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 HMGCLP35914 325 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 ARCN1P48444 511 aaKnown RBP15.56■□□□□ 0.08
RAB40C-202ENST00000509637 TUBB3Q13509 450 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 SEPT6Q14141 434 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 PDK1Q15118 436 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 GPR19Q15760 415 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 CAPRIN2Q6IMN6 1127 aaKnown RBP15.56■□□□□ 0.08
RAB40C-202ENST00000509637 TMEM220Q6QAJ8 160 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 ZNF517Q6ZMY9 492 aaPredicted RBP15.56■□□□□ 0.08
RAB40C-202ENST00000509637 RHOT1Q8IXI2 618 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 C10orf88Q9H8K7 445 aa15.56■□□□□ 0.08
RAB40C-202ENST00000509637 SPTBN1Q01082 2364 aaKnown RBP15.55■□□□□ 0.08
RAB40C-202ENST00000509637 ESPL1Q14674 2120 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 SYCE3A1L190 88 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 SEMA7AO75326 666 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 LCA5LO95447 670 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 CAPN1P07384 714 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 KPNA2P52292 529 aaKnown RBP15.55■□□□□ 0.08
RAB40C-202ENST00000509637 OLIG2Q13516 323 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 ZFYVE27Q5T4F4 411 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 GPRC6AQ5T6X5 926 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 FAM151BQ6UXP7 276 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 RFX6Q8HWS3 928 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 D2HGDHQ8N465 521 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 SIDT2Q8NBJ9 832 aaKnown RBP15.55■□□□□ 0.08
RAB40C-202ENST00000509637 ADAMTS17Q8TE56 1095 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 CTNNBL1Q8WYA6 563 aaPredicted RBP15.55■□□□□ 0.08
RAB40C-202ENST00000509637 ZNF501Q96CX3 271 aaPredicted RBP15.55■□□□□ 0.08
RAB40C-202ENST00000509637 ZDHHC12Q96GR4 267 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 XPO4Q9C0E2 1151 aaKnown RBP15.55■□□□□ 0.08
RAB40C-202ENST00000509637 RAD18Q9NS91 495 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 FGF21Q9NSA1 209 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 SPTLC3Q9NUV7 552 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 KCND3Q9UK17 655 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 RARRES3Q9UL19 164 aa15.55■□□□□ 0.08
RAB40C-202ENST00000509637 A0A0A6YYK5 440 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-202ENST00000509637 GOLGA6L22H0YM25 854 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 SORBS2O94875 1100 aaKnown RBP15.54■□□□□ 0.08
RAB40C-202ENST00000509637 KRT1P04264 644 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 CCNYL3P0C7X3 344 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 PTPN4P29074 926 aa15.54■□□□□ 0.08
RAB40C-202ENST00000509637 PBLDP30039 288 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-202ENST00000509637 CDKN2BP42772 138 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms