RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 BLOC1S5Q8TDH9 187 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 NCSTNQ92542 709 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 RBM41Q96IZ5 413 aaKnown RBP10.72□□□□□ -0.69
RNF4-212ENST00000509258 VPS35Q96QK1 796 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 OSBPL8Q9BZF1 889 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 GBA3Q9H227 469 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 KLHL3Q9UH77 587 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 RSPH14Q9UHP6 348 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 SEC16AO15027 2179 aa10.72□□□□□ -0.69
RNF4-212ENST00000509258 RELNP78509 3460 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 SPENQ96T58 3664 aaKnown RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 LILRA5A6NI73 299 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 HACD1B0YJ81 288 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 CCL22O00626 93 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 POLR1CO15160 346 aaPredicted RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 DDX3YO15523 660 aaKnown RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 SGTAO43765 313 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 STK17BO94768 372 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 EPOP01588 193 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 PRKAR1AP10644 381 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 TYRP1P17643 537 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 PTPN7P35236 360 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 LEPRP48357 1165 aaKnown RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 MC2RQ01718 297 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 ABHD18Q0P651 414 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 XRCC4Q13426 336 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 SEPT6Q14141 434 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 SPARCL1Q14515 664 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 SPA17Q15506 151 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 INSCQ1MX18 579 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 GPRC6AQ5T6X5 926 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 DENND5AQ6IQ26 1287 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 TIPARPQ7Z3E1 657 aaKnown RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 LRRTM4Q86VH4 590 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 BEND7Q8N7W2 519 aaPredicted RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 APOBEC4Q8WW27 367 aaKnown RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 STARD8Q92502 1023 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 RSC1A1Q92681 617 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 SPRY4Q9C004 299 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 FBXO8Q9NRD0 319 aa10.71□□□□□ -0.69
RNF4-212ENST00000509258 SIDT1Q9NXL6 827 aaKnown RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 R3HDM2Q9Y2K5 976 aaKnown RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 TMEM184BQ9Y519 407 aaPredicted RBP10.71□□□□□ -0.69
RNF4-212ENST00000509258 MN1Q10571 1320 aaPredicted RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 MACROD2A1Z1Q3 448 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 BTNL10A8MVZ5 291 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 KMOO15229 486 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 NKX2-8O15522 239 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 KIF1CO43896 1103 aaKnown RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 VEGFDO43915 354 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 CDK14O94921 469 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 VIPP01282 170 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 ANKRD34CP0C6C1 535 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 PRSS56P0CW18 603 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 RBP3P10745 1247 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 AMD1P17707 334 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 VCLP18206 1134 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 XRCC1P18887 633 aaPredicted RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 HLA-DPA1P20036 260 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 SPAM1P38567 509 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 VAV2P52735 878 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 GDF10P55107 478 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 EIF3EP60228 445 aaKnown RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 FOXK1P85037 733 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 XIAPP98170 497 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 TMEM115Q12893 351 aaPredicted RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 MPP3Q13368 585 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 MAP7Q14244 749 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 SKIDA1Q1XH10 827 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 CRTC2Q53ET0 693 aaPredicted RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 ANKRD20A2Q5SQ80 823 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 ANKRD20A1Q5TYW2 823 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 ANKRD20A3Q5VUR7 823 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 DUS1LQ6P1R4 473 aaKnown RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 ABRAXAS1Q6UWZ7 409 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 RANBP10Q6VN20 620 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 TMEM26Q6ZUK4 368 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 BZW1Q7L1Q6 419 aaKnown RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 GLT6D1Q7Z4J2 308 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 TRAPPC5Q8IUR0 188 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 TMTC1Q8IUR5 882 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 KLHDC8BQ8IXV7 354 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 ESX1Q8N693 406 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 LILRA3Q8N6C8 439 aaPredicted RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 OR13C4Q8NGS5 318 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 NRTNQ99748 197 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 TIMM29Q9BSF4 260 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 UCK1Q9HA47 277 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 FKBPLQ9UIM3 349 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 PCDHB3Q9Y5E6 796 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 CAPN6Q9Y6Q1 641 aa10.7□□□□□ -0.7
RNF4-212ENST00000509258 TNRC6AQ8NDV7 1962 aaKnown RBP10.7□□□□□ -0.7
RNF4-212ENST00000509258 GLYATL1P3A0A0U1RQE8 302 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 LOC101059948A0A1B0GTJ6 334 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 OR2AG2A6NM03 316 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 PDZK1P1A8MUH7 402 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 TOX3O15405 576 aaPredicted RBP10.69□□□□□ -0.7
RNF4-212ENST00000509258 KCNN4O15554 427 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 MTSS1O43312 755 aa10.69□□□□□ -0.7
RNF4-212ENST00000509258 METTL18O95568 372 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms