RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 SH3KBP1Q96B97 665 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 OXNAD1Q96HP4 312 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 NAF1Q96HR8 494 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 QKIQ96PU8 341 aaKnown RBP eCLIP7.85□□□□□ -1.155e-10■■■□□ 18.8
UBE2D3-222ENST00000508238 VPS35Q96QK1 796 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 NUDT22Q9BRQ3 303 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 SPATA16Q9BXB7 569 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 GPR63Q9BZJ6 419 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 RBSNQ9H1K0 784 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 EPB41L1Q9H4G0 881 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 SUDS3Q9H7L9 328 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 UCK1Q9HA47 277 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 RDH14Q9HBH5 336 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 IL26Q9NPH9 171 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 WASH6PQ9NQA3 447 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 DNAJB12Q9NXW2 375 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 KCNK4Q9NYG8 393 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 AKAP7Q9P0M2 348 aaPredicted RBP7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 TBC1D29Q9UFV1 150 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 PISDQ9UG56 409 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 TFR2Q9UP52 801 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 REXO2Q9Y3B8 237 aaKnown RBP7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 SPO11Q9Y5K1 396 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 CNTRLQ7Z7A1 2325 aa7.85□□□□□ -1.15
UBE2D3-222ENST00000508238 CCDC66A2RUB6 948 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 AURKAO14965 403 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 KCNJ13O60928 360 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 ZNF189O75820 626 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 ANXA9O76027 345 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 PIRTP0C851 137 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 THRAP10827 490 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 ACP5P13686 325 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 XRCC1P18887 633 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 HLA-DPA1P20036 260 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 CTNNA2P26232 953 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 CXADRP78310 365 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 NOMO1Q15155 1222 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 LLGL1Q15334 1064 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 SLC1A5Q15758 541 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 MAP9Q49MG5 647 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 SIRPB2Q5JXA9 342 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 FAM182AQ5T1J6 154 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 PHF19Q5T6S3 580 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 NKAIN2Q5VXU1 208 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 PCSK4Q6UW60 755 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 ABRAXAS1Q6UWZ7 409 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 RANBP10Q6VN20 620 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 ARHGAP22Q7Z5H3 698 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 SLC9B2Q86UD5 537 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 ZC3H18Q86VM9 953 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 PHYKPLQ8IUZ5 450 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 ZNF547Q8IVP9 402 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 TTC30BQ8N4P2 665 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 LRRC57Q8N9N7 239 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 AGBL5Q8NDL9 886 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 OR10G6Q8NH81 332 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 BRSK1Q8TDC3 778 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 UBE2Q2Q8WVN8 375 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 USP7Q93009 1102 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 PMEPA1Q969W9 287 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 NSUN5Q96P11 429 aaKnown RBP7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 CCNL2Q96S94 520 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 SLC38A3Q99624 504 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 C19orf43Q9BQ61 176 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 FERMT1Q9BQL6 677 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 TIMM29Q9BSF4 260 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 HEMGNQ9BXL5 484 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 OSBPL8Q9BZF1 889 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 LACRTQ9GZZ8 138 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 OR2AG1Q9H205 316 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 CPNE5Q9HCH3 593 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 UBP1Q9NZI7 540 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 IL17CQ9P0M4 197 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 KLHL8Q9P2G9 620 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 GDF2Q9UK05 429 aaPredicted RBP7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 TMPRSS11EQ9UL52 423 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 PRKAB1Q9Y478 270 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 DUSP10Q9Y6W6 482 aa7.84□□□□□ -1.15
UBE2D3-222ENST00000508238 TRBV23OR9-2A0A075B6M9 112 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 PRAMEF33A0A0G2JMD5 474 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 LILRA5A6NI73 299 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 GOLGA6L6A8MZA4 724 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 B4E171 279 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 C9orf172C9J069 976 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 KMOO15229 486 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 DUX1O43812 170 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 PRAMEF10O60809 474 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 CDK14O94921 469 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 TJP3O95049 919 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 LIPCP11150 499 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 FGF3P11487 239 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 CCL4P13236 92 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 ZNF7P17097 686 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 ITIH1P19827 911 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 CSF2RBP32927 897 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 ADRA1AP35348 466 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 SOX18P35713 384 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 ETV5P41161 510 aa7.83□□□□□ -1.16
UBE2D3-222ENST00000508238 TSPAN7P41732 249 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms