RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ZNHIT2Q9UHR6 403 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 TMPRSS11EQ9UL52 423 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 COLEC10Q9Y6Z7 277 aa8.33□□□□□ -1.08
PDGFC-205ENST00000506880 DMXL1Q9Y485 3027 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 A6NCN8 305 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 LILRA5A6NI73 299 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 F5H423 210 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 INPP4BO15327 924 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 SLCO2B1O94956 709 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 LDOC1O95751 146 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 SLC4A1P02730 911 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 NMBRP28336 390 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 HSD17B2P37059 387 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 SLC26A3P40879 764 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 CCNFP41002 786 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 ELK3P41970 407 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 MLLT3P42568 568 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 MAGEA4P43358 317 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 GNPDA1P46926 289 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 ARSDP51689 593 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 FOXK2Q01167 660 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 DNAJC3Q13217 504 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 OLIG2Q13516 323 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 HLTFQ14527 1009 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 NAA25Q14CX7 972 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 INSCQ1MX18 579 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 MAP9Q49MG5 647 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 C14orf28Q4W4Y0 310 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 FNBP1LQ5T0N5 605 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 PSAPL1Q6NUJ1 521 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 CYB5D1Q6P9G0 228 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 EMBQ6PCB8 327 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 TMEM220Q6QAJ8 160 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 ZDHHC24Q6UX98 284 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 UNC5AQ6ZN44 842 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 TAOK1Q7L7X3 1001 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 ERMP1Q7Z2K6 904 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 TAF8Q7Z7C8 310 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 C11orf96Q7Z7L8 435 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 CROCCP2Q86T23 111 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 PRUNE1Q86TP1 453 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 LCA5Q86VQ0 697 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 HOMEZQ8IX15 550 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 PIANPQ8IYJ0 282 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 ZBED8Q8IZ13 594 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 GALNT15Q8N3T1 639 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 SLC25A45Q8N413 288 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 SFRP1Q8N474 314 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 RASGEF1AQ8N9B8 481 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 NOA1Q8NC60 698 aaKnown RBP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 FBXO36Q8NEA4 188 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 LMX1AQ8TE12 382 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 RHBDD1Q8TEB9 315 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 SLC39A7Q92504 469 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 UBXN4Q92575 508 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 LPGAT1Q92604 370 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 TMEM159Q96B96 161 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 VPS39Q96JC1 886 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 CYTH2Q99418 400 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 AGAP2Q99490 1192 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 MYOCQ99972 504 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 RAB11FIP5Q9BXF6 653 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 B3GNT4Q9C0J1 378 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 RAB33BQ9H082 229 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 P2RY12Q9H244 342 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 MVB12BQ9H7P6 319 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 C20orf96Q9NUD7 363 aaPredicted RBP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 TAS2R13Q9NYV9 303 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 TAAR2Q9P1P5 351 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 ZFATQ9P243 1243 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 TXNDC16Q9P2K2 825 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 POLG2Q9UHN1 485 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 FBXO5Q9UKT4 447 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 OAS3Q9Y6K5 1087 aaKnown RBP8.32□□□□□ -1.08
PDGFC-205ENST00000506880 SLCO1B1Q9Y6L6 691 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 PCM1Q15154 2024 aa8.32□□□□□ -1.08
PDGFC-205ENST00000506880 FAM159BA6NKW6 160 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 ZNF839A8K0R7 811 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 GOLGA8MH3BSY2 632 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 IFRD1O00458 451 aaPredicted RBP8.31□□□□□ -1.08
PDGFC-205ENST00000506880 YY2O15391 372 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 TOX3O15405 576 aaPredicted RBP8.31□□□□□ -1.08
PDGFC-205ENST00000506880 UGT1A9O60656 530 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 AVILO75366 819 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 POP7O75817 140 aaKnown RBP8.31□□□□□ -1.08
PDGFC-205ENST00000506880 S1PR4O95977 384 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 GIMD1P0DJR0 217 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 PKMP14618 531 aaKnown RBP8.31□□□□□ -1.08
PDGFC-205ENST00000506880 UGT1A6P19224 532 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 UGT1A1P22309 533 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 UGT1A4P22310 534 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 UGT1A3P35503 534 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 UGT1A5P35504 534 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 ACTR1BP42025 376 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 RGS4P49798 205 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 SERPINB9P50453 376 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 ACTR1AP61163 376 aa8.31□□□□□ -1.08
PDGFC-205ENST00000506880 B4GALNT1Q00973 533 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms