RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 D6RAR5 112 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 KIR2DS3K7RE56 304 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 B4GAT1O43505 415 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 C1QTNF9P0C862 333 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 VCLP18206 1134 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 IDSP22304 550 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 OR1D5P58170 312 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 UBE2IP63279 158 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 MRPS25P82663 173 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 C2orf54Q08AI8 447 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 ITIH4Q14624 930 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 KIR2DS5Q14953 304 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 ST3GAL2Q16842 350 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 ZNF658BQ4V348 819 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 AGAP9Q5VTM2 703 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 ABRAXAS1Q6UWZ7 409 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 WASH2PQ6VEQ5 465 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 PACS1Q6VY07 963 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 RBM44Q6ZP01 1051 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 LILRA3Q8N6C8 439 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 OR2L2Q8NH16 312 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 SARS2Q9NP81 518 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 WASH6PQ9NQA3 447 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 ZNF624Q9P2J8 865 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 FAM8A1Q9UBU6 413 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 ATXN7L1Q9ULK2 861 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 PCDHB1Q9Y5F3 818 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 IGF2RP11717 2491 aa17.91■□□□□ 0.46
PDLIM7-216ENST00000506537 OR52A4PA6NMU1 304 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 OR1I1O60431 355 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 KCNJ13O60928 360 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 CSO75390 466 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 TCEA3O75764 348 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 SLC2A4P14672 509 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 SLC19A1P41440 591 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 HHEXQ03014 270 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 DHX34Q14147 1143 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 SPIDRQ14159 915 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 CLCA4Q14CN2 919 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 METRNLQ641Q3 311 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 TMPRSS9Q7Z410 1059 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 LDB1Q86U70 411 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 HOOK3Q86VS8 718 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 WDR48Q8TAF3 677 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 SIGLEC10Q96LC7 697 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 FCRL3Q96P31 734 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 DEPDC7Q96QD5 511 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 GFM1Q96RP9 751 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 CATSPERZQ9NTU4 200 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 CPNE7Q9UBL6 633 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 PIKFYVEQ9Y2I7 2098 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 KNTC1P50748 2209 aa17.9■□□□□ 0.46
PDLIM7-216ENST00000506537 PRAMEF33A0A0G2JMD5 474 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 SDR42E2A6NKP2 422 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 OR5K4A6NMS3 321 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 TP73O15350 636 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 BANF1O75531 89 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 ALDH4A1P30038 563 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 NSG1P42857 185 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 GPR3P46089 330 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 ARCN1P48444 511 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 BIRC2Q13490 618 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 ISXQ2M1V0 245 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 FASTKD1Q53R41 847 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 ARMC3Q5W041 872 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 KIAA0930Q6ICG6 404 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 CASC4Q6P4E1 433 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 UNQ6494/PRO21346Q6UXR6 183 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 ZNF572Q7Z3I7 529 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 B3GNT8Q7Z7M8 397 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 SLC9B2Q86UD5 537 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 HM13Q8TCT9 377 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 SAMD15Q9P1V8 674 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 PSMD13Q9UNM6 376 aa17.89■□□□□ 0.45
PDLIM7-216ENST00000506537 IGHV1OR21-1A0A087WYE8 117 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 ZCWPW2A0A1B0GU75 182 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 FAM237BA0A1B0GVD1 139 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 GOLGA8KD6RF30 607 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 GOLGA8TH3BQL2 631 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 CD3EAPO15446 510 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 AP2A2O94973 939 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 SEC31AO94979 1220 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 VAPBO95292 243 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 XRCC1P18887 633 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 CD1CP29017 333 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 CSF2RBP32927 897 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 AMZ1Q400G9 498 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 ANKRD20A4Q4UJ75 823 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 MSS51Q4VC12 460 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 LYPLAL1Q5VWZ2 237 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 NKAIN2Q5VXU1 208 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 HIBCHQ6NVY1 386 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 CERS6Q6ZMG9 384 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 PCGF5Q86SE9 256 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 TMEM135Q86UB9 458 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 GPR150Q8NGU9 434 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 ZNF669Q96BR6 464 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 RMDN2Q96LZ7 410 aa17.88■□□□□ 0.45
PDLIM7-216ENST00000506537 PWWP2AQ96N64 755 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms