RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 YIPF1Q9Y548 306 aa3.88□□□□□ -1.79
TOPBP1-204ENST00000505804 CTAGE9A4FU28 777 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 IFITM10A6NMD0 228 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 ANKRD66B4E2M5 251 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 NDUFS4O43181 175 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 XPNPEP2O43895 674 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 ERAL1O75616 437 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 BMP10O95393 424 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 CTAGE8P0CG41 777 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 AMD1P17707 334 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 NR2F2P24468 414 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 FMO5P49326 533 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 HSD17B4P51659 736 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 STAT2P52630 851 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 ARL16Q0P5N6 197 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 NTRK2Q16620 822 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 FAM98BQ52LJ0 330 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 ALS2CLQ60I27 953 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 PLXDC2Q6UX71 529 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF852Q6ZMS4 543 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 C18orf65Q6ZTR6 163 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 PLEKHM3Q6ZWE6 761 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 INTS8Q75QN2 995 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 LDB1Q86U70 411 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 CTAGE4Q8IX94 777 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 RFLNBQ8N5W9 214 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 CDRT15Q96T59 188 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 FKRPQ9H9S5 495 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 TRPC7Q9HCX4 862 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 CHMP1AQ9HD42 196 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 MBNL1Q9NR56 388 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 ABCF3Q9NUQ8 709 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 TERF2IPQ9NYB0 399 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 MRPL15Q9P015 296 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 LARSQ9P2J5 1176 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 AMACRQ9UHK6 382 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 POLG2Q9UHN1 485 aa3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF644Q9H582 1327 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-204ENST00000505804 EME2A4GXA9 379 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 TFAP2AP05549 437 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 CETPP11597 493 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 AKR1B1P15121 316 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 AHRP35869 848 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 DLX5P56178 289 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 RPL24P83731 157 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 GRAPQ13588 217 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 KLHL22Q53GT1 634 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 BMP2KLQ5H9B9 411 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 PDSS1Q5T2R2 415 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 KRT79Q5XKE5 535 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 NR2C2APQ86WQ0 139 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 CIARTQ8N365 385 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 APPL2Q8NEU8 664 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 PRPF31Q8WWY3 499 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 SEMA4DQ92854 862 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 NEUROD6Q96NK8 337 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 SLC22A12Q96S37 553 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 LRRC1Q9BTT6 524 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 CENPOQ9BU64 300 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 SPATC1LQ9H0A9 340 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 KCNK15Q9H427 330 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 DENND2DQ9H6A0 471 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 PSD3Q9NYI0 1048 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF148Q9UQR1 794 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 KAT6BQ8WYB5 2073 aa3.86□□□□□ -1.79
TOPBP1-204ENST00000505804 C15orf62A8K5M9 175 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 CAPN9O14815 690 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 BUD23O43709 281 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 SYNGR3O43761 229 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 KRT36O76013 467 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 GCNT3O95395 438 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 BCL10O95999 233 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 CRYAAP02489 173 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 ATP1A1P05023 1023 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 LIPFP07098 398 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 HOXB6P17509 224 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 NNMTP40261 264 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 TERF1P54274 439 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 SNRPEP62304 92 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 PITX1P78337 314 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 BECN1Q14457 450 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 SIRPB2Q5JXA9 342 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 GDPD4Q6W3E5 623 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 PIWIL4Q7Z3Z4 852 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 HAUS6Q7Z4H7 955 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 GALNT5Q7Z7M9 940 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 RDM1Q8NG50 284 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 TAS1R2Q8TE23 839 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 PTPMT1Q8WUK0 201 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 ERLEC1Q96DZ1 483 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 FAM81BQ96LP2 452 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF582Q96NG8 517 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 GCNAQ96QF7 691 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 ABHD1Q96SE0 405 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 TRMT61BQ9BVS5 477 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 SLA2Q9H6Q3 261 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 CHORDC1Q9UHD1 332 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 KCNG2Q9UJ96 466 aa3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 FAF1Q9UNN5 650 aaPredicted RBP3.85□□□□□ -1.79
TOPBP1-204ENST00000505804 MAGED1Q9Y5V3 778 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms