RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 HAUS5O94927 633 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 SYPP08247 313 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 DGKAP23743 735 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 MAT2AP31153 395 aaKnown RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CDKN2DP55273 166 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CDCP2Q5VXM1 449 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 ACVR1CQ8NER5 493 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 PYROXD1Q8WU10 500 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 COPS8Q99627 209 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 OLFM1Q99784 485 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 SH3GL2Q99962 352 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 GNPTGQ9UJJ9 305 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 A0A087WUV0 522 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 A8MX80 341 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 MAP2K7O14733 419 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC31A1O15431 190 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 GP1BAP07359 652 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 RHOXF2BP0C7M4 288 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 ERVK-10P10266 1014 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CKMT1AP12532 417 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 IRX4P78413 519 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CDKL1Q00532 357 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 PLOD1Q02809 727 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 BOP1Q14137 746 aaKnown RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 CES3Q6UWW8 571 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 SFRP1Q8N474 314 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 FBF1Q8TES7 1133 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 ATOH1Q92858 354 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 KLK6Q92876 244 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC30A3Q99726 388 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 RHOXF2Q9BQY4 288 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 TRIM31Q9BZY9 425 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 SAMD15Q9P1V8 674 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 GALPQ9UBC7 116 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 KLQ9UEF7 1012 aa8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 ATXN2Q99700 1313 aaKnown RBP8.14□□□□□ -1.11
CDC42SE2-208ENST00000505065 MYO1CO00159 1063 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 PRMT5O14744 637 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC16A5O15375 505 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 BUD23O43709 281 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 TNFP01375 233 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 MAOBP27338 520 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 LMAN1P49257 510 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 EPHA4P54764 986 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ARHGAP8P85298 464 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 MPP1Q00013 466 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 BBS9Q3SYG4 887 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 KBTBD12Q3ZCT8 623 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 FASTKD1Q53R41 847 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 CDKL4Q5MAI5 379 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 CNSTQ6PJW8 725 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 C3orf62Q6ZUJ4 267 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 PDZD3Q86UT5 571 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 RIBC1Q8N443 379 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 RMDN2Q96LZ7 410 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ROPN1BQ9BZX4 212 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 VIPAS39Q9H9C1 493 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 COG4Q9H9E3 785 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ROPN1Q9HAT0 212 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 IL21RQ9HBE5 538 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 SSU72Q9NP77 194 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ACSL5Q9ULC5 683 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ARHGEF17Q96PE2 2063 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 NTN3O00634 580 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 GRID2O43424 1007 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 EML2O95834 649 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 CELA2BP08218 269 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 DHPSP49366 369 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 CSNK1EP49674 416 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 BLKP51451 505 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 POU4F1Q01851 419 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 FAM45BPQ6NSW5 357 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 TAB3Q8N5C8 712 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 FAM45AQ8TCE6 357 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 KIR3DX1Q9H7L2 352 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 OGFRQ9NZT2 677 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 RFPL1O75677 317 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ALDOAP04075 364 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 CSRP1P21291 193 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 GP5P40197 560 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 MAPK9P45984 424 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 HNRNPKP61978 463 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 NAA30Q147X3 362 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 EFTUD2Q15029 972 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 IYDQ6PHW0 289 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 UNC5DQ6UXZ4 953 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 RBM12BQ8IXT5 1001 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 RDH14Q9HBH5 336 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 KHNYNO15037 678 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 KPNA5O15131 536 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC25A14O95258 325 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 MSL3P1P0C860 447 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 PKMP14618 531 aaKnown RBP8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 SLC18A2Q05940 514 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ILKQ13418 452 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 KYNUQ16719 465 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 ZNF470Q6ECI4 717 aa8.13□□□□□ -1.11
CDC42SE2-208ENST00000505065 CEP68Q76N32 757 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms