RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 BLOC1S5Q8TDH9 187 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 RSC1A1Q92681 617 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 RTP4Q96DX8 246 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 NRTNQ99748 197 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 FICDQ9BVA6 458 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 SLC12A9Q9BXP2 914 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 SLC39A1Q9NY26 324 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 RSPH14Q9UHP6 348 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 TUBD1Q9UJT1 453 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 PCDHA3Q9Y5H8 950 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 ARL5AQ9Y689 179 aa12.91□□□□□ -0.34
DDX41-204ENST00000504807 EPN1Q9Y6I3 576 aaPredicted RBP12.91□□□□□ -0.34
DDX41-204ENST00000504807 RP1L1Q8IWN7 2480 aaPredicted RBP12.91□□□□□ -0.34
DDX41-204ENST00000504807 MN1Q10571 1320 aaPredicted RBP12.9□□□□□ -0.34
DDX41-204ENST00000504807 F8P00451 2351 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 KIR2DS5A0A0G2JLQ3 304 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 A0A0G2JNG1 304 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 LILRA5A6NI73 299 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 B4E171 279 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 APOC4-APOC2K7ER74 178 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 KIR2DS3K7RE56 304 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 CCL22O00626 93 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 KMOO15229 486 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 CDK14O94921 469 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 APOC2P02655 101 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 ZNF28P17035 718 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 XRCC1P18887 633 aaPredicted RBP12.9□□□□□ -0.34
DDX41-204ENST00000504807 PSMB4P28070 264 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 TSPAN7P41732 249 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 SH3BP2P78314 561 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 MC2RQ01718 297 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 TMEM115Q12893 351 aaPredicted RBP12.9□□□□□ -0.34
DDX41-204ENST00000504807 GPR18Q14330 331 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 KIR2DS5Q14953 304 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 PDPK2PQ6A1A2 396 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 DENND5AQ6IQ26 1287 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 ABRAXAS1Q6UWZ7 409 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 TMEM26Q6ZUK4 368 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 SLC9B2Q86UD5 537 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 CCDC170Q8IYT3 715 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 LILRA3Q8N6C8 439 aaPredicted RBP12.9□□□□□ -0.34
DDX41-204ENST00000504807 BEND7Q8N7W2 519 aaPredicted RBP12.9□□□□□ -0.34
DDX41-204ENST00000504807 AHCYL2Q96HN2 611 aaKnown RBP12.9□□□□□ -0.34
DDX41-204ENST00000504807 PANX2Q96RD6 677 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 TIMM29Q9BSF4 260 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 B3GNT4Q9C0J1 378 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 GBA3Q9H227 469 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 PILRAQ9UKJ1 303 aa12.9□□□□□ -0.34
DDX41-204ENST00000504807 PACSIN2Q9UNF0 486 aaPredicted RBP12.9□□□□□ -0.34
DDX41-204ENST00000504807 LOC101059948A0A1B0GTJ6 334 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 TCRBV7S2A1N4TA0A589 114 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 OR2AG2A6NM03 316 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 HACD1B0YJ81 288 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 STMND1H3BQB6 276 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 H7C0C1 242 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 VEGFDO43915 354 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 RAD1O60671 282 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 SEMA7AO75326 666 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 EPOP01588 193 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 C9P02748 559 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 GNLYP22749 145 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 CTNNA2P26232 953 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 CSTF2P33240 577 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX41-204ENST00000504807 SPAM1P38567 509 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 ATP5OP48047 213 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 EPHA4P54764 986 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 XIAPP98170 497 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 PEX6Q13608 980 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 SPARCL1Q14515 664 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 GPRC6AQ5T6X5 926 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 DUS1LQ6P1R4 473 aaKnown RBP12.89□□□□□ -0.35
DDX41-204ENST00000504807 RANBP10Q6VN20 620 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 GLT6D1Q7Z4J2 308 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 CCDC110Q8TBZ0 833 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 MRFAP1L1Q96HT8 127 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
DDX41-204ENST00000504807 C9orf72Q96LT7 481 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 OSBPL8Q9BZF1 889 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 SLC40A1Q9NP59 571 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 FKBPLQ9UIM3 349 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 PSMD13Q9UNM6 376 aa12.89□□□□□ -0.35
DDX41-204ENST00000504807 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
DDX41-204ENST00000504807 GLYATL1P3A0A0U1RQE8 302 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 PDZK1P1A8MUH7 402 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 GPR89AB7ZAQ6 455 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 DDX3YO15523 660 aaKnown RBP12.88□□□□□ -0.35
DDX41-204ENST00000504807 UBXN7O94888 489 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 DLGAP3O95886 979 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 GPR89BP0CG08 455 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 PRSS56P0CW18 603 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 F8A1P23610 371 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 CD82P27701 267 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 PTPN7P35236 360 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 PPM1FP49593 454 aaPredicted RBP12.88□□□□□ -0.35
DDX41-204ENST00000504807 MPP3Q13368 585 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 XRCC4Q13426 336 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 NFE2L1Q14494 772 aa12.88□□□□□ -0.35
DDX41-204ENST00000504807 ANKRD20A2Q5SQ80 823 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms