RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RTN4RQ9BZR6 473 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 RAD21L1Q9H4I0 556 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 PSD3Q9NYI0 1048 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SMARCAL1Q9NZC9 954 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF224Q9NZL3 707 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 MORF4L1Q9UBU8 362 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 CFDP1Q9UEE9 299 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SIX4Q9UIU6 781 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 TSPYL4Q9UJ04 414 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 ACAD8Q9UKU7 415 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 B3GALT5Q9Y2C3 310 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 PCDHGA5Q9Y5G8 931 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 FAM169AQ9Y6X4 670 aa2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF644Q9H582 1327 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P35-201ENST00000503360 LOC102723996A0A087X1L8 192 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 A0A0G2JPF8 293 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 hCG_1809904A0A1W2PP81 198 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 A0A1W2PPE2 198 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 A0A1W2PR64 198 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 DENND3A2RUS2 1198 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 A6NL46 340 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 HNRNPCL3B7ZW38 293 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM189-UBE2V1I3L0A0 370 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 J3QR06 171 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZWINTO95229 277 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PAPSS2O95340 614 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PMS2P2O95744 297 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 BCL10O95999 233 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PTMAP06454 111 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 HNRNPCL4P0DMR1 293 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 MYOD1P15172 320 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PRLRP16471 622 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 IL11P20809 199 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 NMBRP28336 390 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 OAS2P29728 719 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 GNL1P36915 607 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 LIG4P49917 911 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 CD81P60033 236 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ERVFC1-1P60608 527 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ISL1P61371 349 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 COG7P83436 770 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PLIN5Q00G26 463 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 CXCL9Q07325 125 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC20A2Q08357 652 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 KIF5AQ12840 1032 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 UBE2V1Q13404 147 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PRPF4BQ13523 1007 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 GRAPQ13588 217 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 BAATQ14032 418 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 MVPQ14764 893 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC39A14Q15043 492 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SYT16Q17RD7 645 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM266Q2M3C6 531 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 FAM98BQ52LJ0 330 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZDHHC20Q5W0Z9 365 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 KRT79Q5XKE5 535 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC30A6Q6NXT4 461 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TPRG1Q6ZUI0 275 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 INTS8Q75QN2 995 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 KRT74Q7RTS7 529 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ATG9AQ7Z3C6 839 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADGRA1Q86SQ6 560 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SNX32Q86XE0 403 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PM20D2Q8IYS1 436 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 C1orf87Q8N0U7 546 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 NDUFAF2Q8N183 169 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 MINDY1Q8N5J2 469 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC5A8Q8N695 610 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 GCSAMQ8N6F7 178 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC38A9Q8NBW4 561 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 KCTD6Q8NC69 237 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 LILRB1Q8NHL6 650 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 THAP6Q8TBB0 222 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PTPMT1Q8WUK0 201 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC38A5Q8WUX1 472 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ABTB1Q969K4 478 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PIGTQ969N2 578 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF622Q969S3 477 aaKnown RBP eCLIP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 PTERQ96BW5 349 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMCO6Q96DC7 493 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 RTP4Q96DX8 246 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ADGRG7Q96K78 797 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZMAT2Q96NC0 199 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 DACH2Q96NX9 599 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 CDRT15Q96T59 188 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 GFI1Q99684 422 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 HGH1Q9BTY7 390 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TXLNGYQ9BZA5 131 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SPATC1LQ9H0A9 340 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 GAREM1Q9H706 876 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 CHMP1AQ9HD42 196 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC35C2Q9NQQ7 365 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TMEM30AQ9NV96 361 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 ARGLU1Q9NWB6 273 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TRMT1Q9NXH9 659 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 TAS2R14Q9NYV8 317 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 LARSQ9P2J5 1176 aaKnown RBP2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 MALT1Q9UDY8 824 aa2.37□□□□□ -2.03
HMGB1P35-201ENST00000503360 HACL1Q9UJ83 578 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms