RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 LRRC8BQ6P9F7 803 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 TMEM26Q6ZUK4 368 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 ZNF761Q86XN6 746 aaPredicted RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 TRIM48Q8IWZ4 208 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 RBM12BQ8IXT5 1001 aaKnown RBP12.73□□□□□ -0.37
RACK1-202ENST00000502548 PIANPQ8IYJ0 282 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 OR4D9Q8NGE8 314 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 OR13J1Q8NGT2 312 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 HDAC10Q969S8 669 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 TTC1Q99614 292 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 IL22Q9GZX6 179 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 SEMA6CQ9H3T2 930 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 EPB41L1Q9H4G0 881 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 SLC40A1Q9NP59 571 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 PDP2Q9P2J9 529 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 PYCARDQ9ULZ3 195 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 WDR37Q9Y2I8 494 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 TCAF1Q9Y4C2 921 aa12.73□□□□□ -0.37
RACK1-202ENST00000502548 GOLGA4Q13439 2230 aaKnown RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 IGHV5-10-1A0A0J9YXX1 117 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 GOLGA6L10A0A0M3HER8 536 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 LILRA5A6NI73 299 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 OR52A4PA6NMU1 304 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 DUX1O43812 170 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 AP2A2O94973 939 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 TNFSF15O95150 251 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 PRSS56P0CW18 603 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 EIF2S3P41091 472 aaKnown RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 NSG1P42857 185 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 MAGEA6P43360 314 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 FNTAP49354 379 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 PPM1FP49593 454 aaPredicted RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 PRLHRP49683 370 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 ITIH4Q14624 930 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 PHF19Q5T6S3 580 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 LYPLAL1Q5VWZ2 237 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 PAPD7Q5XG87 772 aaKnown RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 WDR74Q6RFH5 385 aaPredicted RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 CERS6Q6ZMG9 384 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 FAM83HQ6ZRV2 1179 aaPredicted RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 CFAP206Q8IYR0 622 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 PPHLN1Q8NEY8 458 aaKnown RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 OR6P1Q8NGX9 317 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 OR4L1Q8NH43 312 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 SNIP1Q8TAD8 396 aaKnown RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 GRK7Q8WTQ7 553 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.72□□□□□ -0.373e-26■□□□□ 9.7
RACK1-202ENST00000502548 CXorf40BQ96DE9 158 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 ZNF778Q96MU6 729 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 TBC1D10AQ9BXI6 508 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 ASCL3Q9NQ33 180 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 CHRAC1Q9NRG0 131 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 THSD1Q9NS62 852 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 POT1Q9NUX5 634 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 SMARCAL1Q9NZC9 954 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 AKAP7Q9P0M2 348 aaPredicted RBP12.72□□□□□ -0.37
RACK1-202ENST00000502548 SLC2A6Q9UGQ3 507 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 NEU2Q9Y3R4 380 aa12.72□□□□□ -0.37
RACK1-202ENST00000502548 A0A087WV48 116 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 TCRBV7S3A2A0A539 114 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 OR51F1A6NGY5 319 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 CDRT15L2A8MXV6 281 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 QSOX1O00391 747 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 HGSO14964 777 aaPredicted RBP12.71□□□□□ -0.37
RACK1-202ENST00000502548 RRP8O43159 456 aaKnown RBP12.71□□□□□ -0.37
RACK1-202ENST00000502548 TLX3O43711 291 aaPredicted RBP12.71□□□□□ -0.37
RACK1-202ENST00000502548 PHF2O75151 1096 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 GOT2P00505 430 aaKnown RBP12.71□□□□□ -0.37
RACK1-202ENST00000502548 POLBP06746 335 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 ITGA2BP08514 1039 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 GSTM1P09488 218 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 JMJD7P0C870 316 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 PBLDP30039 288 aaPredicted RBP12.71□□□□□ -0.37
RACK1-202ENST00000502548 FOXN2P32314 431 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 PPARGP37231 505 aaPredicted RBP12.71□□□□□ -0.37
RACK1-202ENST00000502548 VPS41P49754 854 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 PRAMEP78395 509 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 GSTM4Q03013 218 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 RPE65Q16518 533 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 DBN1Q16643 649 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 AFTPHQ6ULP2 937 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 CLDN19Q8N6F1 224 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 NAT14Q8WUY8 206 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 ZFPM2Q8WW38 1151 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 NCSTNQ92542 709 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 CCDC97Q96F63 343 aaPredicted RBP12.71□□□□□ -0.37
RACK1-202ENST00000502548 CCM2Q9BSQ5 444 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 VPS37BQ9H9H4 285 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 PSMD13Q9UNM6 376 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 LOXL2Q9Y4K0 774 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 ASXL3Q9C0F0 2248 aa12.71□□□□□ -0.37
RACK1-202ENST00000502548 CEP295Q9C0D2 2601 aa12.71□□□□□ -0.38
RACK1-202ENST00000502548 CHD8Q9HCK8 2581 aa12.7□□□□□ -0.38
RACK1-202ENST00000502548 PRAMEF33A0A0G2JMD5 474 aa12.7□□□□□ -0.38
RACK1-202ENST00000502548 PMS2P1A4D2B8 440 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms