RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 VASH2Q86V25 355 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 AMZ2Q86W34 360 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 PLXDC1Q8IUK5 500 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 RBM12BQ8IXT5 1001 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 BMPERQ8N8U9 685 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 RASGEF1AQ8N9B8 481 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 OR4K2Q8NGD2 314 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 ZNF398Q8TD17 642 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 PMEPA1Q969W9 287 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 CXorf40BQ96DE9 158 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 SGF29Q96ES7 293 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 TBL1YQ9BQ87 522 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 ASPSCR1Q9BZE9 553 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 SMOXQ9NWM0 555 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 DNMT3AQ9Y6K1 912 aaPredicted RBP8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 ZFYVE26Q68DK2 2539 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 IGSF10Q6WRI0 2623 aa8.33□□□□□ -1.08
HMGXB4-207ENST00000498212 OR52A4PA6NMU1 304 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 GOLGA6L6A8MZA4 724 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 POP7O75817 140 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 SRP72O76094 671 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 UBXN7O94888 489 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 C9P02748 559 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 TYRP1P17643 537 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 MSH3P20585 1137 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 PBLDP30039 288 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 CTSCP53634 463 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 GFERP55789 205 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 PDE1BQ01064 536 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 MC2RQ01718 297 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 DMPKQ09013 629 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 MSLNQ13421 630 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 GPR18Q14330 331 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 SPARCL1Q14515 664 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 CLCA4Q14CN2 919 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 LONRF2Q1L5Z9 754 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 ANKS6Q68DC2 871 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 TMEM220Q6QAJ8 160 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 CEACAM20Q6UY09 585 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 ARHGEF18Q6ZSZ5 1173 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 IL22RA1Q8N6P7 574 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 ZSCAN1Q8NBB4 408 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 OR13C4Q8NGS5 318 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 JPH3Q8WXH2 748 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 NKD1Q969G9 470 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 HES6Q96HZ4 224 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 ZNF514Q96K75 400 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 TEFMQ96QE5 360 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 ASB8Q9H765 288 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 ARNT2Q9HBZ2 717 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 SLC40A1Q9NP59 571 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 FBXO8Q9NRD0 319 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 OGFRQ9NZT2 677 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 FEZ2Q9UHY8 353 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 FKBPLQ9UIM3 349 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 CRLS1Q9UJA2 301 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 PSMD13Q9UNM6 376 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 WDR37Q9Y2I8 494 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 KCTD3Q9Y597 815 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 SLC30A1Q9Y6M5 507 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 CAPN6Q9Y6Q1 641 aa8.32□□□□□ -1.08
HMGXB4-207ENST00000498212 TOX3O15405 576 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 ANKRD34CP0C6C1 535 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 HADHAP40939 763 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 ZNF140P52738 457 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 GDF10P55107 478 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 TMPRSS15P98073 1019 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 XIAPP98170 497 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 LY6DQ14210 128 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 NFE2L1Q14494 772 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 PARP6Q2NL67 630 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 P3H1Q32P28 736 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 FNBP1LQ5T0N5 605 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 KCTD11Q693B1 232 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 DENND5AQ6IQ26 1287 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 FAM83HQ6ZRV2 1179 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 DET1Q7L5Y6 550 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 KLHDC8BQ8IXV7 354 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 CACNA2D3Q8IZS8 1091 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 ZNF843Q8N446 348 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 RNF10Q8N5U6 811 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 BEND7Q8N7W2 519 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 FAM71DQ8N9W8 422 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 RTP4Q96DX8 246 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 C9orf72Q96LT7 481 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 TGM7Q96PF1 710 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 CTRCQ99895 268 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 C19orf43Q9BQ61 176 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 ZPBPQ9BS86 351 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 TMEM121Q9BTD3 319 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 TSGA10Q9BZW7 698 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 ZNF768Q9H5H4 540 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 R3HDM2Q9Y2K5 976 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
HMGXB4-207ENST00000498212 TCRBV7S2A1N4TA0A589 114 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 KLHL33A6NCF5 533 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 MGAT4DA6NG13 374 aa8.3□□□□□ -1.08
HMGXB4-207ENST00000498212 AGAP14A8MT82 685 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms