RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ATXN3P54252 364 aaPredicted RBP12.3□□□□□ -0.44
AFF3-215ENST00000498090 ADARP55265 1226 aaKnown RBP12.3□□□□□ -0.44
AFF3-215ENST00000498090 KCNK10P57789 538 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 GNA12Q03113 381 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 OR4D1Q15615 310 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 NADSYN1Q6IA69 706 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 UGT3A1Q6NUS8 523 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 BLOC1S3Q6QNY0 202 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 RYBPQ8N488 228 aaPredicted RBP12.3□□□□□ -0.44
AFF3-215ENST00000498090 TNIP2Q8NFZ5 429 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 ING5Q8WYH8 240 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 GFM2Q969S9 779 aaKnown RBP12.3□□□□□ -0.44
AFF3-215ENST00000498090 PLD4Q96BZ4 506 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 MYEOVQ96EZ4 313 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 CINPQ9BW66 212 aaPredicted RBP12.3□□□□□ -0.44
AFF3-215ENST00000498090 SMG9Q9H0W8 520 aaKnown RBP12.3□□□□□ -0.44
AFF3-215ENST00000498090 TIMMDC1Q9NPL8 285 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 MAP10Q9P2G4 905 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 UBA2Q9UBT2 640 aaPredicted RBP12.3□□□□□ -0.44
AFF3-215ENST00000498090 A0A0C4DFX4 3053 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 UNC80Q8N2C7 3258 aa12.3□□□□□ -0.44
AFF3-215ENST00000498090 TRAV19A0A0A6YYK7 116 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ATP6AP2A0A1C7CYW4 349 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 C7orf72A4D263 438 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ANKRD33BA6NCL7 494 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 SUPT3HB4E1H0 165 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 IFRD1O00458 451 aaPredicted RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 AKAP10O43572 662 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 KDELR3O43731 214 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 SUPT3HO75486 399 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 CLDN11O75508 207 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ATP6AP2O75787 350 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ESRRBO95718 433 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 CYBBP04839 570 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 CKMP06732 381 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 EEF1DP29692 281 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 ACVRL1P37023 503 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 CDH13P55290 713 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 NME5P56597 212 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 EEFSECP57772 596 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 SLC7A9P82251 487 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 KCTD21Q4G0X4 260 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 PDCD4Q53EL6 469 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 MTX3Q5HYI7 312 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 IYDQ6PHW0 289 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 RPS27LQ71UM5 84 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 GPR149Q86SP6 731 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 RETREG3Q86VR2 466 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 PTRH1Q86Y79 214 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 SLC15A3Q8IY34 581 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 TRIML2Q8N7C3 387 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 OR56A4Q8NGH8 313 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 OR9I1Q8NGQ6 314 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 OR13C4Q8NGS5 318 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 LRRC58Q96CX6 371 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 RMND5BQ96G75 393 aaPredicted RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 HIC2Q96JB3 615 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ZSWIM3Q96MP5 696 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 TMEM79Q9BSE2 394 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ADGRE3Q9BY15 652 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 BRINP2Q9C0B6 783 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 GRIP2Q9C0E4 1043 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 FBRSL1Q9HCM7 1045 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 CD320Q9NPF0 282 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ZIM2Q9NZV7 527 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 POLG2Q9UHN1 485 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 GPR45Q9Y5Y3 372 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 DOCK6Q96HP0 2047 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 DENND4CQ5VZ89 1909 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 ILVBLA1L0T0 632 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 H3BMM5 538 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 H3BNH8 94 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 NME4O00746 187 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 SCAMP3O14828 347 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 MUSKO15146 869 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 INSIG1O15503 277 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 HTRA2O43464 458 aaPredicted RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 ACSL4O60488 711 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 EEDO75530 441 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 TMCC1O94876 653 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 BMP10O95393 424 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 PRAMEF12O95522 483 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 PFKLP17858 780 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 LPOP22079 712 aaPredicted RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 IGFBP4P22692 258 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 DDX6P26196 483 aaKnown RBP eCLIP12.29□□□□□ -0.44
AFF3-215ENST00000498090 CORO1AP31146 461 aaKnown RBP12.29□□□□□ -0.44
AFF3-215ENST00000498090 GRIA3P42263 894 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 OXCT1P55809 520 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 RCAN2Q14206 197 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 GALNT3Q14435 633 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 SEMA3AQ14563 771 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 COL19A1Q14993 1142 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 NRF1Q16656 503 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 MYLK3Q32MK0 819 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 NHSL2Q5HYW2 709 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 TBCELQ5QJ74 424 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 TMTC4Q5T4D3 741 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 LAYNQ6UX15 382 aa12.29□□□□□ -0.44
AFF3-215ENST00000498090 CYP2R1Q6VVX0 501 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms