RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ATP5OP48047 213 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 LEPRP48357 1165 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 SEPHS1P49903 392 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 CSRP3P50461 194 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 GEMP55040 296 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 NFKB2Q00653 900 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 ADCY2Q08462 1091 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 CDC20Q12834 499 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 XRCC4Q13426 336 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 GPR18Q14330 331 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 IL11RAQ14626 422 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 CHRNA6Q15825 494 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 CACHD1Q5VU97 1274 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 ITPRIPL1Q6GPH6 555 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 IRGCQ6NXR0 463 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 KLHL35Q6PF15 583 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 TIPARPQ7Z3E1 657 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 PRSS42Q7Z5A4 293 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 DAAM2Q86T65 1068 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 RASGRP3Q8IV61 690 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 CCDC170Q8IYT3 715 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 UNC5BQ8IZJ1 945 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 OXNAD1Q96HP4 312 aaPredicted RBP11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 OR6C1Q96RD1 312 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 GOLPH3Q9H4A6 298 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 ZNF768Q9H5H4 540 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 SIDT1Q9NXL6 827 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 IL17BQ9UHF5 180 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 PIEZO2Q9H5I5 2752 aa11.54□□□□□ -0.56
NUDCD3-211ENST00000497978 OR2AG2A6NM03 316 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 C2orf81A6NN90 581 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 APOC4-APOC2K7ER74 178 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 NKX2-8O15522 239 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 UGT1A9O60656 530 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 STK10O94804 968 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 LCA5LO95447 670 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 APOC2P02655 101 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 UGT1A6P19224 532 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 TCN2P20062 427 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 MSH3P20585 1137 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 UGT1A1P22309 533 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 UGT1A4P22310 534 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 CTNNA2P26232 953 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 AKT1P31749 480 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 STAT5AP42229 794 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 COPS2P61201 443 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 DMPKQ09013 629 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 PRPSAP1Q14558 356 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 LONRF2Q1L5Z9 754 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 LCE2DQ5TA82 110 aaPredicted RBP11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 TMEM220Q6QAJ8 160 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 SARM1Q6SZW1 724 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 C6orf15Q6UXA7 325 aaPredicted RBP11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 FAM92BQ6ZTR7 304 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 BBS12Q6ZW61 710 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 RASGEF1AQ8N9B8 481 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 TC2NQ8N9U0 490 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 DDHD1Q8NEL9 900 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 STARD8Q92502 1023 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 RSC1A1Q92681 617 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 STAMBPL1Q96FJ0 436 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 ZNF514Q96K75 400 aaPredicted RBP11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 HEMGNQ9BXL5 484 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 TRIM4Q9C037 500 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 RAB33BQ9H082 229 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 UGT1A7Q9HAW7 530 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 UGT1A10Q9HAW8 530 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 UGT1A8Q9HAW9 530 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 SMOXQ9NWM0 555 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 EPHA6Q9UF33 1036 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 WDR37Q9Y2I8 494 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 PCDHB3Q9Y5E6 796 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 RPS6KL1Q9Y6S9 549 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 CFAP46Q8IYW2 2715 aa11.53□□□□□ -0.56
NUDCD3-211ENST00000497978 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 KLHL33A6NCF5 533 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 TERTO14746 1132 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 BUD23O43709 281 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 NDUFA10O95299 355 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 IPO7O95373 1038 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 AGTP01019 485 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 MT-ND3P03897 115 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 CCNYL3P0C7X3 344 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 LPOP22079 712 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 RBL1P28749 1068 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 PBLDP30039 288 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 DLSTP36957 453 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 CETN2P41208 172 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 MARCKSL1P49006 195 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 CTSCP53634 463 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 NAP1L1P55209 391 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 SH3BP2P78314 561 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 PDE1BQ01064 536 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 SEPT6Q14141 434 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 PLCL1Q15111 1095 aa11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 TAF1AQ15573 450 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-211ENST00000497978 RPE65Q16518 533 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms