RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 LRRN3Q9H3W5 708 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 SARS2Q9NP81 518 aaKnown RBP11.27□□□□□ -0.61
HLA-B-254ENST00000497377 SLC23A2Q9UGH3 650 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 UNC13CQ8NB66 2214 aa11.27□□□□□ -0.61
HLA-B-254ENST00000497377 C17orf113A0A1B0GUU1 675 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 TCRBV7S3A2A0A539 114 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 MAGEB16A2A368 324 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 CCDC78A2IDD5 438 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 CCDC162PA2VCL2 907 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 FAM149AA5PLN7 773 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 MGAT4DA6NG13 374 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 OR2AG2A6NM03 316 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 CCL22O00626 93 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 SNX2O60749 519 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 AP2A2O94973 939 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 RPLP0P05388 317 aaKnown RBP11.26□□□□□ -0.61
HLA-B-254ENST00000497377 XRCC1P18887 633 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-254ENST00000497377 MGAT1P26572 445 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 FOXN2P32314 431 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 HALP42357 657 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 NSG1P42857 185 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 CTSCP53634 463 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 CCL7P80098 99 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 GPLD1P80108 840 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 B4GALNT1Q00973 533 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 DR1Q01658 176 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 HHEXQ03014 270 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 SQSTM1Q13501 440 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 DBN1Q16643 649 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 ISXQ2M1V0 245 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 PLA2G4EQ3MJ16 856 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-254ENST00000497377 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 ZNF534Q76KX8 674 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 SFTPA2Q8IWL1 248 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 RBM12BQ8IXT5 1001 aaKnown RBP11.26□□□□□ -0.61
HLA-B-254ENST00000497377 MPP5Q8N3R9 675 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 BEND7Q8N7W2 519 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-254ENST00000497377 OR6P1Q8NGX9 317 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 OR2L2Q8NH16 312 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 OR4L1Q8NH43 312 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 PATE1Q8WXA2 126 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 NXPE2Q96DL1 559 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 SGF29Q96ES7 293 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 ZNF778Q96MU6 729 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 TMEM74Q96NL1 305 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 NRSN2Q9GZP1 204 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 EPB41L1Q9H4G0 881 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 FAM96AQ9H5X1 160 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 UCK1Q9HA47 277 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 PRDM8Q9NQV8 689 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 CHRAC1Q9NRG0 131 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 TREX1Q9NSU2 369 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 SAMD15Q9P1V8 674 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 CPNE7Q9UBL6 633 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 DKK4Q9UBT3 224 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 ASIC3Q9UHC3 531 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 ANAPC5Q9UJX4 755 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 ACSL5Q9ULC5 683 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 SOX13Q9UN79 622 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 DNAJC16Q9Y2G8 782 aa11.26□□□□□ -0.61
HLA-B-254ENST00000497377 TPRP12270 2363 aaKnown RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 AKAP13Q12802 2813 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 ACACBO00763 2458 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 PIKFYVEQ9Y2I7 2098 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 SDR42E2A6NKP2 422 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 PDZK1P1A8MUH7 402 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 D6RAR5 112 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 NDC80O14777 642 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 FANCGO15287 622 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 PPM1DO15297 605 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 GPR37O15354 613 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 SGTAO43765 313 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 CSO75390 466 aaKnown RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 TMEM63AO94886 807 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 EML2O95834 649 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 GOT2P00505 430 aaKnown RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 TUBB4AP04350 444 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 PAMP19021 973 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 PTGIRP43119 386 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 MAGEA3P43357 314 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 CDKN1CP49918 316 aaPredicted RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 EPHA4P54764 986 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 UBE2IP63279 158 aaKnown RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 DHX34Q14147 1143 aaKnown RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 RTP5Q14D33 572 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 FASTKD1Q53R41 847 aaKnown RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 ANKRD22Q5VYY1 191 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 METRNLQ641Q3 311 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 ZNF449Q6P9G9 518 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 SYT10Q6XYQ8 523 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 LIAT1Q6ZQX7 453 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 DET1Q7L5Y6 550 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 PIM3Q86V86 326 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 CAND1Q86VP6 1230 aaKnown RBP11.25□□□□□ -0.61
HLA-B-254ENST00000497377 HOOK3Q86VS8 718 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 TRIM48Q8IWZ4 208 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 KLHL7Q8IXQ5 586 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 PIANPQ8IYJ0 282 aa11.25□□□□□ -0.61
HLA-B-254ENST00000497377 C17orf53Q8N3J3 647 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms