RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KCNK10P57789 538 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ERVPABLB-1P60509 514 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 GTF2H2Q13888 395 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 RCAN2Q14206 197 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 FUT11Q495W5 492 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 PDCD4Q53EL6 469 aaKnown RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 IL23RQ5VWK5 629 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 GTF2H2CQ6P1K8 395 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 LETMD1Q6P1Q0 360 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 MACC1Q6ZN28 852 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 USP45Q70EL2 814 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 TSPAN33Q86UF1 283 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 TICAM1Q8IUC6 712 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 NXPE1Q8N323 547 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 TMEM199Q8N511 208 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 CLDN19Q8N6F1 224 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 NAT14Q8WUY8 206 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 PBXIP1Q96AQ6 731 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ISG20Q96AZ6 181 aaKnown RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ECHDC3Q96DC8 303 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 DUS3LQ96G46 650 aaKnown RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 CDK15Q96Q40 435 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 ACOX2Q99424 681 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 C11orf49Q9H6J7 331 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 HECAQ9UBI9 543 aaPredicted RBP12.87□□□□□ -0.35
GARNL3-220ENST00000496711 SLC25A13Q9UJS0 675 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 AP4S1Q9Y587 144 aa12.87□□□□□ -0.35
GARNL3-220ENST00000496711 NME4O00746 187 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 TXNDC9O14530 226 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 KIAA0355O15063 1070 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 GRM6O15303 877 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 CCL16O15467 120 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 RNASEH2AO75792 299 aaKnown RBP12.86□□□□□ -0.35
GARNL3-220ENST00000496711 TRIM16O95361 564 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 CAPNS1P04632 268 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 UGT1A6P19224 532 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 UGT1A1P22309 533 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 UGT1A4P22310 534 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 HLA-FP30511 346 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 UGT1A3P35503 534 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 UGT1A5P35504 534 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 MYLK3Q32MK0 819 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 C18orf21Q32NC0 220 aaPredicted RBP12.86□□□□□ -0.35
GARNL3-220ENST00000496711 ATP6AP1LQ52LC2 224 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 CRTC1Q6UUV9 634 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 SCIMPQ6UWF3 145 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 TPRG1Q6ZUI0 275 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 OTOP2Q7RTS6 562 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 DHFR2Q86XF0 187 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 CHCHD4Q8N4Q1 142 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 DCBLD1Q8N8Z6 715 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 TMEM102Q8N9M5 508 aaPredicted RBP12.86□□□□□ -0.35
GARNL3-220ENST00000496711 KLHL23Q8NBE8 558 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 VOPP1Q96AW1 172 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 Q9H521 79 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 IL1RL2Q9HB29 575 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 SLC52A3Q9NQ40 469 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 ST14Q9Y5Y6 855 aa12.86□□□□□ -0.35
GARNL3-220ENST00000496711 PLXNA2O75051 1894 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 A0A1W2PP18 115 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 AGAP14A8MT82 685 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 A8MX80 341 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 OR7A17O14581 309 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 DNAJA2O60884 412 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 OTCP00480 354 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CAPN1P07384 714 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 HSD17B1P14061 328 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 FOLH1Q04609 750 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 BNIP2Q12982 314 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 TTLL9Q3SXZ7 439 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 C6orf136Q5SQH8 315 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 GPRC6AQ5T6X5 926 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 LRRC66Q68CR7 880 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 FBXL19Q6PCT2 694 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CYP2R1Q6VVX0 501 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 GPR26Q8NDV2 337 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 OR4F6Q8NGB9 312 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 METTL6Q8TCB7 284 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SLC22A17Q8WUG5 538 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 LRRC58Q96CX6 371 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 ASIC4Q96FT7 647 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SCRN2Q96FV2 425 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 SLC45A3Q96JT2 553 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 C1orf50Q9BV19 199 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 APOL5Q9BWW9 433 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 EMILIN2Q9BXX0 1053 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 TRIM54Q9BYV2 358 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 TRIM15Q9C019 465 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CEP44Q9C0F1 390 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 ZDHHC6Q9H6R6 413 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 TMEM45AQ9NWC5 275 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 ZIM2Q9NZV7 527 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 PTBP2Q9UKA9 531 aaKnown RBP12.85□□□□□ -0.35
GARNL3-220ENST00000496711 RAB26Q9ULW5 256 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 CCL26Q9Y258 94 aa12.85□□□□□ -0.35
GARNL3-220ENST00000496711 BNIP3LO60238 219 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms