RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 APMAPQ9HDC9 416 aa11.99□□□□□ -0.49
HDLBP-246ENST00000496569 SMOXQ9NWM0 555 aa11.99□□□□□ -0.49
HDLBP-246ENST00000496569 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
HDLBP-246ENST00000496569 CRLS1Q9UJA2 301 aa11.99□□□□□ -0.49
HDLBP-246ENST00000496569 PCDHGA7Q9Y5G6 932 aa11.99□□□□□ -0.49
HDLBP-246ENST00000496569 B3GALT1Q9Y5Z6 326 aa11.99□□□□□ -0.49
HDLBP-246ENST00000496569 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
HDLBP-246ENST00000496569 KALRNO60229 2985 aa11.99□□□□□ -0.49
HDLBP-246ENST00000496569 LILRA5A6NI73 299 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 GPR89AB7ZAQ6 455 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 CRTAMO95727 393 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 AP2A1O95782 977 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 CCDC175P0C221 793 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 GPR89BP0CG08 455 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 SLC2A4P14672 509 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 IDSP22304 550 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 CXCR5P32302 372 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 CSTF2P33240 577 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDLBP-246ENST00000496569 LEPRP48357 1165 aaKnown RBP11.98□□□□□ -0.49
HDLBP-246ENST00000496569 TERF1P54274 439 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 TMPRSS3P57727 454 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 COL9A2Q14055 689 aaPredicted RBP11.98□□□□□ -0.49
HDLBP-246ENST00000496569 BROXQ5VW32 411 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 ZDHHC20Q5W0Z9 365 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 ANKS6Q68DC2 871 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 PCSK4Q6UW60 755 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 ABRAXAS1Q6UWZ7 409 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 GPR155Q7Z3F1 870 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 AMZ2Q86W34 360 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 CCDC112Q8NEF3 446 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 CXorf40BQ96DE9 158 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 TGM7Q96PF1 710 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 NRTNQ99748 197 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 WWP1Q9H0M0 922 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 LRRC40Q9H9A6 602 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 ETNK1Q9HBU6 452 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 ARNT2Q9HBZ2 717 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 ZNF148Q9UQR1 794 aa11.98□□□□□ -0.49
HDLBP-246ENST00000496569 MN1Q10571 1320 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-246ENST00000496569 OR5K4A6NMS3 321 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 HGSO14964 777 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-246ENST00000496569 NVLO15381 856 aaKnown RBP11.97□□□□□ -0.49
HDLBP-246ENST00000496569 KIF1CO43896 1103 aaKnown RBP11.97□□□□□ -0.49
HDLBP-246ENST00000496569 POLBP06746 335 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 XRCC1P18887 633 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-246ENST00000496569 MLLT3P42568 568 aaPredicted RBP11.97□□□□□ -0.49
HDLBP-246ENST00000496569 KCNJ1P48048 391 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 SEPHS1P49903 392 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 SQSTM1Q13501 440 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 RPE65Q16518 533 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 ZRANB3Q5FWF4 1079 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 ARHGAP22Q7Z5H3 698 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 SERPINA9Q86WD7 417 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 PIANPQ8IYJ0 282 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 NXPE1Q8N323 547 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 BMPERQ8N8U9 685 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 AGBL5Q8NDL9 886 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 SH3KBP1Q96B97 665 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 RTP4Q96DX8 246 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 RMDN2Q96LZ7 410 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 TLR10Q9BXR5 811 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 DPH1Q9BZG8 443 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 ZCCHC2Q9C0B9 1178 aaKnown RBP11.97□□□□□ -0.49
HDLBP-246ENST00000496569 IMP3Q9NV31 184 aaKnown RBP11.97□□□□□ -0.49
HDLBP-246ENST00000496569 SLC2A6Q9UGQ3 507 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 PPP2R2CQ9Y2T4 447 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
HDLBP-246ENST00000496569 TEX51A0A1B0GUA7 166 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 ZW10O43264 779 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 PPFIA2O75334 1257 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 UBXN7O94888 489 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 LIPCP11150 499 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 AMD1P17707 334 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 VCLP18206 1134 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 ITGALP20701 1170 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 ARCN1P48444 511 aaKnown RBP11.96□□□□□ -0.49
HDLBP-246ENST00000496569 EPHA4P54764 986 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 SH3BP2P78314 561 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 VAC14Q08AM6 782 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 DMPKQ09013 629 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 TRA2AQ13595 282 aaKnown RBP eCLIP11.96□□□□□ -0.49
HDLBP-246ENST00000496569 DBN1Q16643 649 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 LONRF2Q1L5Z9 754 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 P3H1Q32P28 736 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 AGAP9Q5VTM2 703 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 FAM92BQ6ZTR7 304 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 TAS2R42Q7RTR8 314 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 CLDN19Q8N6F1 224 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 DTX3LQ8TDB6 740 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 TMEM159Q96B96 161 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 C12orf66Q96MD2 445 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 ZNF778Q96MU6 729 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 ALS2CR12Q96Q35 445 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 TAAR9Q96RI9 348 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 INSM2Q96T92 566 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-246ENST00000496569 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.96□□□□□ -0.49
HDLBP-246ENST00000496569 SLC40A1Q9NP59 571 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 POT1Q9NUX5 634 aa11.96□□□□□ -0.49
HDLBP-246ENST00000496569 NLE1Q9NVX2 485 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms