RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ENO3P13929 434 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-214ENST00000495485 CALB2P22676 271 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SERPINB3P29508 390 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 ADSLP30566 484 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-214ENST00000495485 MAPK9P45984 424 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 HERVK_113P63132 956 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 IRX1P78414 480 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-214ENST00000495485 ARL13AQ5H913 290 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-214ENST00000495485 TTC23LQ6PF05 361 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 CLNKQ7Z7G1 428 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 GPSM1Q86YR5 675 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 CHCHD4Q8N4Q1 142 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 IL17RCQ8NAC3 791 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 GPR26Q8NDV2 337 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 ANKRD49Q8WVL7 239 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 EZH1Q92800 747 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-214ENST00000495485 KLHL29Q96CT2 875 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SGF29Q96ES7 293 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 NSL1Q96IY1 281 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SORT1Q99523 831 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 CCDC28BQ9BUN5 200 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 ERVK-6Q9BXR3 956 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 TRIM54Q9BYV2 358 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 ZCCHC2Q9C0B9 1178 aaKnown RBP10.13□□□□□ -0.79
HDAC3-214ENST00000495485 RASSF4Q9H2L5 321 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SMOXQ9NWM0 555 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 MARCOQ9UEW3 520 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-214ENST00000495485 PCDHGA2Q9Y5H1 932 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 CAPN7Q9Y6W3 813 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SCN8AQ9UQD0 1980 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 CACNA1EQ15878 2313 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 OTOGLQ3ZCN5 2332 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 FRYLO94915 3013 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 PI4KAP42356 2102 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 ZNF292O60281 2723 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 A8MX80 341 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 PRRT4C9JH25 899 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 BTN3A1O00481 513 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 NEMP1O14524 444 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 FCHO1O14526 889 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 WNT9AO14904 365 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 SLC22A2O15244 555 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 PI15O43692 258 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ZBTB14O43829 449 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 OR1I1O60431 355 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 SYNCRIPO60506 623 aaKnown RBP10.12□□□□□ -0.79
HDAC3-214ENST00000495485 DIAPH2O60879 1101 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ZNF217O75362 1048 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 LYPLA1O75608 230 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-214ENST00000495485 SLC25A14O95258 325 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-214ENST00000495485 TRIM16O95361 564 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 MLYCDO95822 493 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 CHEK2O96017 543 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 FTH1P02794 183 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 GSTM1P09488 218 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 SBK3P0C264 359 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ATP1B2P14415 290 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-214ENST00000495485 HOXB2P14652 356 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 TIMP2P16035 220 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 MSH3P20585 1137 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 AKT1P31749 480 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 TIE1P35590 1138 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 CDKN1CP49918 316 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ALDH18A1P54886 795 aaKnown RBP10.12□□□□□ -0.79
HDAC3-214ENST00000495485 SATB1Q01826 763 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 GSTM4Q03013 218 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ZNF234Q14588 700 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ACOX1Q15067 660 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 C2orf27AQ580R0 203 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 CDKL4Q5MAI5 379 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 CTSL3PQ5NE16 218 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ZNF678Q5SXM1 525 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ANKS6Q68DC2 871 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 METTL2BQ6P1Q9 378 aaKnown RBP10.12□□□□□ -0.79
HDAC3-214ENST00000495485 EPGNQ6UW88 154 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 TMEM207Q6UWW9 146 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 FRMD7Q6ZUT3 714 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ZNF765Q7L2R6 523 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 TSPAN33Q86UF1 283 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 PIM3Q86V86 326 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ZSWIM9Q86XI8 627 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 SPATA6LQ8N4H0 392 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ZBTB2Q8N680 514 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 TXNDC5Q8NBS9 432 aaKnown RBP10.12□□□□□ -0.79
HDAC3-214ENST00000495485 TSTD1Q8NFU3 115 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 PIP4K2CQ8TBX8 421 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 CD200R1Q8TD46 325 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 SORCS1Q8WY21 1168 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 NELL1Q92832 810 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 SKA1Q96BD8 255 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 EID2BQ96D98 161 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 PHF21BQ96EK2 531 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 LINGO1Q96FE5 620 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 VPS35Q96QK1 796 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 TMEM245Q9H330 911 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 COG4Q9H9E3 785 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 PCDH12Q9NPG4 1184 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 PNPOQ9NVS9 261 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 ZSCAN32Q9NX65 697 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms