RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ARHGEF18Q6ZSZ5 1173 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 TRIM48Q8IWZ4 208 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 SYCE1Q8N0S2 351 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 BMPERQ8N8U9 685 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 AGBL5Q8NDL9 886 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 SLC35B2Q8TB61 432 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 C1orf54Q8WWF1 131 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 TTC9Q92623 222 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 RSC1A1Q92681 617 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 TMEM159Q96B96 161 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 DNAJC1Q96KC8 554 aaKnown RBP10.42□□□□□ -0.74
NELFE-213ENST00000494956 TAAR9Q96RI9 348 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 NRTNQ99748 197 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 STN1Q9H668 368 aaKnown RBP10.42□□□□□ -0.74
NELFE-213ENST00000494956 PDP2Q9P2J9 529 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 ACSL6Q9UKU0 697 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 AAR2Q9Y312 384 aaKnown RBP10.42□□□□□ -0.74
NELFE-213ENST00000494956 PIKFYVEQ9Y2I7 2098 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 GOLGA6L9A6NEM1 432 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 LILRA5A6NI73 299 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 OR5K4A6NMS3 321 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 EIF4E1BA6NMX2 242 aaKnown RBP10.41□□□□□ -0.74
NELFE-213ENST00000494956 C2orf81A6NN90 581 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 MIF4GDA9UHW6 222 aaKnown RBP10.41□□□□□ -0.74
NELFE-213ENST00000494956 UBXN7O94888 489 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 AMD1P17707 334 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 SEPHS1P49903 392 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 EPHA4P54764 986 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 UCNP55089 124 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 SH3BP2P78314 561 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 TRA2AQ13595 282 aaKnown RBP eCLIP10.41□□□□□ -0.74
NELFE-213ENST00000494956 SNX1Q13596 522 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 ITGA9Q13797 1035 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 SEPT6Q14141 434 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 CLPPQ16740 277 aaPredicted RBP10.41□□□□□ -0.74
NELFE-213ENST00000494956 PARP6Q2NL67 630 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 TAF1BQ53T94 588 aaPredicted RBP10.41□□□□□ -0.74
NELFE-213ENST00000494956 ZDHHC20Q5W0Z9 365 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 WDR74Q6RFH5 385 aaPredicted RBP10.41□□□□□ -0.74
NELFE-213ENST00000494956 AMZ2Q86W34 360 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 DTX1Q86Y01 620 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 KLHDC8BQ8IXV7 354 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 GLIS1Q8NBF1 620 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 DTX3LQ8TDB6 740 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 BRSK1Q8TDC3 778 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 SH3KBP1Q96B97 665 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 CXorf40BQ96DE9 158 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 TGM7Q96PF1 710 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 FERMT1Q9BQL6 677 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.41□□□□□ -0.74
NELFE-213ENST00000494956 OCEL1Q9H607 264 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 SLC40A1Q9NP59 571 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 LZTFL1Q9NQ48 299 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 SMOXQ9NWM0 555 aa10.41□□□□□ -0.74
NELFE-213ENST00000494956 MN1Q10571 1320 aaPredicted RBP10.4□□□□□ -0.74
NELFE-213ENST00000494956 OR51F1A6NGY5 319 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 CAPN5O15484 640 aaPredicted RBP10.4□□□□□ -0.74
NELFE-213ENST00000494956 C9P02748 559 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 POLBP06746 335 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 MC4RP32245 332 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 GRIA1P42261 906 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 POU6F1Q14863 301 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 RPE65Q16518 533 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 CCDC38Q502W7 563 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 ZRANB3Q5FWF4 1079 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 MANEAQ5SRI9 462 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 SEL1L2Q5TEA6 688 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 TMEM164Q5U3C3 297 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 AGAP9Q5VTM2 703 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 WASH2PQ6VEQ5 465 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 FAM92BQ6ZTR7 304 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 TIPARPQ7Z3E1 657 aaKnown RBP10.4□□□□□ -0.74
NELFE-213ENST00000494956 UNC5BQ8IZJ1 945 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 TTC13Q8NBP0 860 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 OR52K1Q8NGK4 314 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 SNRNP27Q8WVK2 155 aaKnown RBP10.4□□□□□ -0.74
NELFE-213ENST00000494956 NKD1Q969G9 470 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 RTP4Q96DX8 246 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 ELMO2Q96JJ3 720 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 INSM2Q96T92 566 aaPredicted RBP10.4□□□□□ -0.74
NELFE-213ENST00000494956 DPYSL5Q9BPU6 564 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 WWP1Q9H0M0 922 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 ARNT2Q9HBZ2 717 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 WASH6PQ9NQA3 447 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 POT1Q9NUX5 634 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 IMP3Q9NV31 184 aaKnown RBP10.4□□□□□ -0.74
NELFE-213ENST00000494956 CRLS1Q9UJA2 301 aa10.4□□□□□ -0.74
NELFE-213ENST00000494956 MGAT4DA6NG13 374 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 B4E171 279 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 STMND1H3BQB6 276 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 ERVH48-1M5A8F1 160 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 LIASO43766 372 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 PPFIA2O75334 1257 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 CRTAMO95727 393 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 IFNB1P01574 187 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 ZSCAN5DPP0CG00 497 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 ZNF28P17035 718 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 VCLP18206 1134 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 TSPAN7P41732 249 aa10.39□□□□□ -0.75
NELFE-213ENST00000494956 ARCN1P48444 511 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms