RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 THRAP10827 490 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 HGFP14210 728 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 ATP1B2P14415 290 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-211ENST00000494800 ETS1P14921 441 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 UCNP55089 124 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 BASP1P80723 227 aaKnown RBP17.32■□□□□ 0.36
HDAC4-211ENST00000494800 ZNF449Q6P9G9 518 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 ZNF574Q6ZN55 896 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-211ENST00000494800 TMEM26Q6ZUK4 368 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 PLXDC1Q8IUK5 500 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 OR2L2Q8NH16 312 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 CDKN2AIPNLQ96HQ2 116 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
HDAC4-211ENST00000494800 FAM96AQ9H5X1 160 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 EIF2B3Q9NR50 452 aaKnown RBP17.32■□□□□ 0.36
HDAC4-211ENST00000494800 ZDHHC3Q9NYG2 299 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 SCHIP1Q9P0W5 487 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-211ENST00000494800 ACSL5Q9ULC5 683 aa17.32■□□□□ 0.36
HDAC4-211ENST00000494800 ARHGEF17Q96PE2 2063 aaPredicted RBP17.32■□□□□ 0.36
HDAC4-211ENST00000494800 PMS2P1A4D2B8 440 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 MROH6A6NGR9 719 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 CCL22O00626 93 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 ZZEF1O43149 2961 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 SLC35G4P0C7Q5 338 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 HOXB3P14651 431 aaPredicted RBP17.31■□□□□ 0.36
HDAC4-211ENST00000494800 AMD1P17707 334 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 ADRA1DP25100 572 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 ACRV1P26436 265 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 CSF2RBP32927 897 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 CA5AP35218 305 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 RPL22P35268 128 aaKnown RBP17.31■□□□□ 0.36
HDAC4-211ENST00000494800 SLC19A1P41440 591 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 MAPK10P53779 464 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 NFE2L1Q14494 772 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 C16orf72Q14CZ0 275 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 METRNLQ641Q3 311 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 SPACA3Q8IXA5 215 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 RCBTB1Q8NDN9 531 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 PPHLN1Q8NEY8 458 aaKnown RBP17.31■□□□□ 0.36
HDAC4-211ENST00000494800 LINC00615Q96LM1 132 aaPredicted RBP17.31■□□□□ 0.36
HDAC4-211ENST00000494800 RANBP9Q96S59 729 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 TBC1D10AQ9BXI6 508 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 B3GNT4Q9C0J1 378 aa17.31■□□□□ 0.36
HDAC4-211ENST00000494800 ZNF624Q9P2J8 865 aaPredicted RBP17.31■□□□□ 0.36
HDAC4-211ENST00000494800 ANKRD11Q6UB99 2663 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-211ENST00000494800 OR52A4PA6NMU1 304 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 F8W8V4 182 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 AGRPO00253 132 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 QSOX1O00391 747 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 NVLO15381 856 aaKnown RBP17.3■□□□□ 0.36
HDAC4-211ENST00000494800 KLK10O43240 276 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 UBXN7O94888 489 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 ZSCAN5DPP0CG00 497 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 BRAFP15056 766 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 ITIH1P19827 911 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 MPSTP25325 297 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 SLC5A2P31639 672 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 PRLHRP49683 370 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 CCDC38Q502W7 563 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 LYPLAL1Q5VWZ2 237 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 KLHL35Q6PF15 583 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 PRUNE1Q86TP1 453 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 SERPINA9Q86WD7 417 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 CCM2Q9BSQ5 444 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 SLC40A1Q9NP59 571 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 CASS4Q9NQ75 786 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 PDP2Q9P2J9 529 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 RIMKLBQ9ULI2 386 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 PSMD13Q9UNM6 376 aa17.3■□□□□ 0.36
HDAC4-211ENST00000494800 ZNF106Q9H2Y7 1883 aaKnown RBP17.29■□□□□ 0.36
HDAC4-211ENST00000494800 APC2O95996 2303 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 TRBV5-4A0A0C4DH59 114 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 GOLGA6L10A0A0M3HER8 536 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 C17orf113A0A1B0GUU1 675 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 CCDC78A2IDD5 438 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 PGRMC1O00264 195 aaKnown RBP17.29■□□□□ 0.36
HDAC4-211ENST00000494800 AP2A2O94973 939 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 GSTM1P09488 218 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 CD82P27701 267 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 ITPKBP27987 946 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 PPARGP37231 505 aaPredicted RBP17.29■□□□□ 0.36
HDAC4-211ENST00000494800 KCNJ1P48048 391 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 SARNPP82979 210 aaKnown RBP17.29■□□□□ 0.36
HDAC4-211ENST00000494800 CDK16Q00536 496 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 GSTM4Q03013 218 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 CFHR1Q03591 330 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 TLE3Q04726 772 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 GSE1Q14687 1217 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 CLCA4Q14CN2 919 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 RPE65Q16518 533 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 SNAP47Q5SQN1 464 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 TSTD2Q5T7W7 516 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 AFTPHQ6ULP2 937 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 REXO1L1PQ8IX06 675 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 CFAP206Q8IYR0 622 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 RASGEF1CQ8N431 466 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 PRELID2Q8N945 189 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 GLIS1Q8NBF1 620 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 HM13Q8TCT9 377 aa17.29■□□□□ 0.36
HDAC4-211ENST00000494800 PEX13Q92968 403 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms