RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RTP4Q96DX8 246 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 ZNF514Q96K75 400 aaPredicted RBP32.61■■■□□ 2.81
CBX4-203ENST00000494546 DNAJC1Q96KC8 554 aaKnown RBP32.61■■■□□ 2.81
CBX4-203ENST00000494546 POT1Q9NUX5 634 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 ZNF148Q9UQR1 794 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 SSUH2Q9Y2M2 353 aa32.61■■■□□ 2.81
CBX4-203ENST00000494546 IFNB1P01574 187 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 ITGALP20701 1170 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 DMPKQ09013 629 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 SNX1Q13596 522 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 NFE2L1Q14494 772 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 FAM83HQ6ZRV2 1179 aaPredicted RBP32.6■■■□□ 2.81
CBX4-203ENST00000494546 ZNF662Q6ZS27 426 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 ULK4Q96C45 1275 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 DCUN1D1Q96GG9 259 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 TAAR9Q96RI9 348 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 OCIAD1Q9NX40 245 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 PSMD13Q9UNM6 376 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 SLC30A1Q9Y6M5 507 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 ZNF106Q9H2Y7 1883 aaKnown RBP32.6■■■□□ 2.81
CBX4-203ENST00000494546 CACNA1GO43497 2377 aa32.6■■■□□ 2.81
CBX4-203ENST00000494546 EFCAB7A8K855 629 aa32.59■■■□□ 2.81
CBX4-203ENST00000494546 TYRP1P17643 537 aa32.59■■■□□ 2.81
CBX4-203ENST00000494546 CCZ1BP86790 482 aa32.59■■■□□ 2.81
CBX4-203ENST00000494546 CCZ1P86791 482 aaPredicted RBP32.59■■■□□ 2.81
CBX4-203ENST00000494546 POU6F1Q14863 301 aa32.59■■■□□ 2.81
CBX4-203ENST00000494546 SNX20Q7Z614 316 aa32.59■■■□□ 2.81
CBX4-203ENST00000494546 ART4Q93070 314 aa32.59■■■□□ 2.81
CBX4-203ENST00000494546 BBC3Q96PG8 261 aaPredicted RBP32.59■■■□□ 2.81
CBX4-203ENST00000494546 UBL7Q96S82 380 aaPredicted RBP32.59■■■□□ 2.81
CBX4-203ENST00000494546 UBXN7O94888 489 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 LIPCP11150 499 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 AMD1P17707 334 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 MC4RP32245 332 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 VAC14Q08AM6 782 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 PLXDC1Q8IUK5 500 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 NXPE1Q8N323 547 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 PMEPA1Q969W9 287 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 CCNL2Q96S94 520 aaPredicted RBP32.58■■■□□ 2.81
CBX4-203ENST00000494546 C19orf43Q9BQ61 176 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 B3GNT4Q9C0J1 378 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 SLC40A1Q9NP59 571 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 SLC39A1Q9NY26 324 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 OGFRQ9NZT2 677 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 FAM8A1Q9UBU6 413 aa32.58■■■□□ 2.81
CBX4-203ENST00000494546 TEX51A0A1B0GUA7 166 aa32.57■■■□□ 2.8
CBX4-203ENST00000494546 NRDCO43847 1150 aa32.57■■■□□ 2.8
CBX4-203ENST00000494546 RALBP11234 206 aa32.57■■■□□ 2.8
CBX4-203ENST00000494546 GPR18Q14330 331 aa32.57■■■□□ 2.8
CBX4-203ENST00000494546 CCDC81Q6ZN84 652 aa32.57■■■□□ 2.8
CBX4-203ENST00000494546 ARHGAP22Q7Z5H3 698 aa32.57■■■□□ 2.8
CBX4-203ENST00000494546 LINC00523Q86TU6 105 aa32.57■■■□□ 2.8
CBX4-203ENST00000494546 ETNK1Q9HBU6 452 aa32.57■■■□□ 2.8
CBX4-203ENST00000494546 AGAP14A8MT82 685 aa32.56■■■□□ 2.8
CBX4-203ENST00000494546 LMAN1P49257 510 aa32.56■■■□□ 2.8
CBX4-203ENST00000494546 ZRANB3Q5FWF4 1079 aa32.56■■■□□ 2.8
CBX4-203ENST00000494546 MICALCLQ6ZW33 695 aa32.56■■■□□ 2.8
CBX4-203ENST00000494546 PRUNE1Q86TP1 453 aa32.56■■■□□ 2.8
CBX4-203ENST00000494546 RBM12BQ8IXT5 1001 aaKnown RBP32.56■■■□□ 2.8
CBX4-203ENST00000494546 COPS8Q99627 209 aa32.56■■■□□ 2.8
CBX4-203ENST00000494546 NLE1Q9NVX2 485 aaPredicted RBP32.56■■■□□ 2.8
CBX4-203ENST00000494546 PCDHB11Q9Y5F2 797 aa32.56■■■□□ 2.8
CBX4-203ENST00000494546 MGAT4DA6NG13 374 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 ETS1P14921 441 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 CD82P27701 267 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 GFERP55789 205 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 RPE65Q16518 533 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 BCL7AQ4VC05 210 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 DNAAF3Q8N9W5 541 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 OR52K1Q8NGK4 314 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 PCDHGA3Q9Y5H0 932 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 B3GALT1Q9Y5Z6 326 aa32.55■■■□□ 2.8
CBX4-203ENST00000494546 MN1Q10571 1320 aaPredicted RBP32.54■■■□□ 2.8
CBX4-203ENST00000494546 BPTFQ12830 3046 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 CCDC78A2IDD5 438 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 B4E171 279 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 CFAP99D6REC4 459 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 E7EVH7 732 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 FDFT1P37268 417 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 TSPAN7P41732 249 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 CDKN1CP49918 316 aaPredicted RBP32.54■■■□□ 2.8
CBX4-203ENST00000494546 GPR33Q49SQ1 333 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 METRNLQ641Q3 311 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 TAS2R42Q7RTR8 314 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 CCDC89Q8N998 374 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 TRIM58Q8NG06 486 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 OR2L2Q8NH16 312 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 STYXQ8WUJ0 223 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 TGM7Q96PF1 710 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 PPP2R2CQ9Y2T4 447 aa32.54■■■□□ 2.8
CBX4-203ENST00000494546 ERI2A8K979 691 aaKnown RBP32.53■■■□□ 2.8
CBX4-203ENST00000494546 K7ENP7 123 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 SGTAO43765 313 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 SRSF6Q13247 344 aaKnown RBP32.53■■■□□ 2.8
CBX4-203ENST00000494546 SIX1Q15475 284 aaPredicted RBP32.53■■■□□ 2.8
CBX4-203ENST00000494546 INO80CQ6PI98 192 aaPredicted RBP32.53■■■□□ 2.8
CBX4-203ENST00000494546 PPP1R21Q6ZMI0 780 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 BMPERQ8N8U9 685 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 GPR150Q8NGU9 434 aa32.53■■■□□ 2.8
CBX4-203ENST00000494546 HEXDCQ8WVB3 486 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms