RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 LILRA5A6NI73 299 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 B4E171 279 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 GPR89AB7ZAQ6 455 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 STMND1H3BQB6 276 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 STX7O15400 261 aaKnown RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 CAPN5O15484 640 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 SGTAO43765 313 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 KIF1CO43896 1103 aaKnown RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 ANXA9O76027 345 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 TJP3O95049 919 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 METTL18O95568 372 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 VIPP01282 170 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 GPR89BP0CG08 455 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 PRSS56P0CW18 603 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 SLC2A4P14672 509 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 XRCC1P18887 633 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 IDSP22304 550 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 TSPAN7P41732 249 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 TNNT3P45378 269 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 EPHA4P54764 986 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 GDF10P55107 478 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 PPP1CAP62136 330 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 SH3BP2P78314 561 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 XIAPP98170 497 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 MC2RQ01718 297 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 GTF2H3Q13889 308 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 GPR18Q14330 331 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 NFE2L1Q14494 772 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 FNBP1LQ5T0N5 605 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 ITPRIPL1Q6GPH6 555 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 XKR5Q6UX68 686 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 TIPARPQ7Z3E1 657 aaKnown RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 PEX26Q7Z412 305 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 PACS2Q86VP3 889 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 TRIM48Q8IWZ4 208 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 LILRA3Q8N6C8 439 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 FAM71DQ8N9W8 422 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 LSM14AQ8ND56 463 aaKnown RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 DDHD1Q8NEL9 900 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 ANKK1Q8NFD2 765 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 GPR150Q8NGU9 434 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 ZNF398Q8TD17 642 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 RSC1A1Q92681 617 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 EXTL1Q92935 676 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 RTP4Q96DX8 246 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 SGF29Q96ES7 293 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 SPATA13Q96N96 652 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 TTC25Q96NG3 672 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 TGM7Q96PF1 710 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 DPYSL5Q9BPU6 564 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 SPRY4Q9C004 299 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 SLC40A1Q9NP59 571 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 PIH1D1Q9NWS0 290 aaKnown RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 AMFRQ9UKV5 643 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 PKP3Q9Y446 797 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 PCDHB11Q9Y5F2 797 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 CFAP20Q9Y6A4 193 aaKnown RBP8.38□□□□□ -1.07
LRCH3-219ENST00000494069 CAPN6Q9Y6Q1 641 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 CFAP46Q8IYW2 2715 aa8.38□□□□□ -1.07
LRCH3-219ENST00000494069 MN1Q10571 1320 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 C5orf60A6NFR6 353 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 RAD1O60671 282 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 SRP72O76094 671 aaKnown RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 UBXN7O94888 489 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 ZIC2O95409 532 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 PRAMEF1O95521 474 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 LIFP15018 202 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 ZNF28P17035 718 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 AMD1P17707 334 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 TPH1P17752 444 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 LPOP22079 712 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 CD82P27701 267 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 AKT1P31749 480 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 SEPHS1P49903 392 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 CDKN1CP49918 316 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 KLF1Q13351 362 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 TAF1AQ15573 450 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 RPE65Q16518 533 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 KCTD19Q17RG1 926 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 LDLRAP1Q5SW96 308 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 DCAF12Q5T6F0 453 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 AGAP9Q5VTM2 703 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 ZDHHC20Q5W0Z9 365 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 DUS1LQ6P1R4 473 aaKnown RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 WASH2PQ6VEQ5 465 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 FAM92BQ6ZTR7 304 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 PRUNE1Q86TP1 453 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 AMZ2Q86W34 360 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 KLHDC8BQ8IXV7 354 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 UNC5BQ8IZJ1 945 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 DTX3LQ8TDB6 740 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 BRSK1Q8TDC3 778 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 ATG4AQ8WYN0 398 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 CXorf40BQ96DE9 158 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 WBP1Q96G27 269 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 ELMO2Q96JJ3 720 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 CALR3Q96L12 384 aaKnown RBP8.37□□□□□ -1.07
LRCH3-219ENST00000494069 C9orf72Q96LT7 481 aa8.37□□□□□ -1.07
LRCH3-219ENST00000494069 TBL1YQ9BQ87 522 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms