RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	ABCG8	Q9H221	673 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	RHBG	Q9H310	441 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	EPHX3	Q9H6B9	360 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	NARFL	Q9H6Q4	476 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	GORASP2	Q9H8Y8	452 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	TM9SF3	Q9HD45	589 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SLC2A4RG	Q9NR83	387 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	RASSF1	Q9NS23	344 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	ABHD10	Q9NUJ1	306 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	NKIRAS2	Q9NYR9	191 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	TAS2R14	Q9NYV8	317 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	COX16	Q9P0S2	106 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	PADI4	Q9UM07	663 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	GAB2	Q9UQC2	676 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	FAM86C2P	A6NEL3	165 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	HMX3	A6NHT5	357 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SMIM23	A6NLE4	172 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	KRT86	O43790	486 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	APEH	P13798	732 aa	Known RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	ARSA	P15289	507 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	TCP1	P17987	556 aa	Known RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	ITIH1	P19827	911 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	MMP8	P22894	467 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	F8A1	P23610	371 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SLC5A2	P31639	672 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	GABRB2	P47870	512 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	ENTPD1	P49961	510 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	CARD18	P57730	90 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	FOLH1	Q04609	750 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	CCIN	Q13939	588 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	HADH	Q16836	314 aa	Known RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	IER5L	Q5T953	404 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SYPL2	Q5VXT5	272 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SLC26A9	Q7LBE3	791 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	TAC4	Q86UU9	113 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	CNGA4	Q8IV77	575 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	AVL9	Q8NBF6	648 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	ICA1L	Q8NDH6	482 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	DNASE1L2	Q92874	299 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	TAMM41	Q96BW9	452 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	TUBGCP3	Q96CW5	907 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	MTBP	Q96DY7	904 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SNX18	Q96RF0	628 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	RPRD1B	Q9NQG5	326 aa	Known RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	INTS10	Q9NVR2	710 aa	Known RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	HCN2	Q9UL51	889 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	SNX6	Q9UNH7	406 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	PCDHGB7	Q9Y5F8	929 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	PMF1-BGLAP	U3KQ54	211 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	WDFY4	Q6ZS81	3184 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	COL4A2	P08572	1712 aa		11.48	□□□□□ -0.57
BRCA1-222	ENST00000493919	PHF2	O75151	1096 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	TMEM127	O75204	238 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	STC2	O76061	302 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	POLB	P06746	335 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	CORO1A	P31146	461 aa	Known RBP	11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	GRIA2	P42262	883 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	SOX9	P48436	509 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	CDK9	P50750	372 aa	Known RBP	11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	BAMBI	Q13145	260 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	SELENBP1	Q13228	472 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	SERINC3	Q13530	473 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	GALNT3	Q14435	633 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	PDGFRL	Q15198	375 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	MSANTD2	Q6P1R3	559 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	TXNDC11	Q6PKC3	985 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	ZNF852	Q6ZMS4	543 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	TPRG1	Q6ZUI0	275 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	MON1B	Q7L1V2	547 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	CPA6	Q8N4T0	437 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	ZNF276	Q8N554	614 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	EIF1AD	Q8N9N8	165 aa	Known RBP	11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	ZNF527	Q8NB42	609 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	OLIG1	Q8TAK6	271 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	SERPINB11	Q96P15	392 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	DNAJC7	Q99615	494 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	SEC22C	Q9BRL7	303 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	GPR61	Q9BZJ8	451 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	POLR1E	Q9GZS1	481 aa	Known RBP	11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	MFSD1	Q9H3U5	465 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	SLA2	Q9H6Q3	261 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	ARHGAP20	Q9P2F6	1191 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	ADAMTS1	Q9UHI8	967 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	IPO11	Q9UI26	975 aa	Known RBP	11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	ADGRG1	Q9Y653	693 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	TECTA	O75443	2155 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	TRAV20	A0A0B4J274	112 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	E2F8	A0AVK6	867 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	FAM25A	B3EWG3	89 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	FAM25C	B3EWG5	89 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	FAM25G	B3EWG6	89 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919		H0YJX3	145 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	RNF103	O00237	685 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	ARNTL	O00327	626 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	STK25	O00506	426 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	DDX3X	O00571	662 aa	Known RBP eCLIP	11.47	□□□□□ -0.57	1e-8	■■■□□ 17.6
BRCA1-222	ENST00000493919	GJB6	O95452	261 aa		11.47	□□□□□ -0.57
BRCA1-222	ENST00000493919	MOCS2	O96007	188 aa	Predicted RBP	11.47	□□□□□ -0.57

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