RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PLA2G4EQ3MJ16 856 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SHQ1Q6PI26 577 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 FAM151BQ6UXP7 276 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 UNC93AQ86WB7 457 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SPATA6LQ8N4H0 392 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 OR52J3Q8NH60 311 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 THRSPQ92748 146 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 APOLD1Q96LR9 279 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 NELFAQ9H3P2 528 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TUT1Q9H6E5 874 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 FANCFQ9NPI8 374 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 KBTBD4Q9NVX7 518 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 DNAJC28Q9NX36 388 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 KCTD5Q9NXV2 234 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF510Q9Y2H8 683 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 NOTOA8MTQ0 251 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 CCRL2O00421 344 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ITGAVP06756 1048 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ITPKAP23677 461 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 VARSP26640 1264 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PTPN9P43378 593 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 KHKP50053 298 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TLE2Q04725 743 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 MAD2L1BPQ15013 274 aaPredicted RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TOR1AIP1Q5JTV8 583 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 C3orf33Q6P1S2 294 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 SPATA22Q8NHS9 363 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 EXOSC8Q96B26 276 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TSSK3Q96PN8 268 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TM6SF2Q9BZW4 377 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 TMEM184CQ9NVA4 438 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 PNPOQ9NVS9 261 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 GLS2Q9UI32 602 aa7.79□□□□□ -1.16
BRCA1-221ENST00000493795 USP42Q9H9J4 1324 aaKnown RBP7.79□□□□□ -1.16
BRCA1-221ENST00000493795 ADAMTS3O15072 1205 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 INSRRP14616 1297 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ERP29P30040 261 aaKnown RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 CCKBRP32239 447 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 GLP1RP43220 463 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ZNF143P52747 638 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 CDH12P55289 794 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PRR5P85299 388 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 LRRC38Q5VT99 294 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 SMARCD3Q6STE5 483 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ZPBP2Q6X784 338 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 BEND4Q6ZU67 534 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 TXNRD3Q86VQ6 643 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 RALGPS2Q86X27 583 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 OR5J2Q8NH18 312 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 MYO19Q96H55 970 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 EBNA1BP2Q99848 306 aaKnown RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 RPL36Q9Y3U8 105 aaKnown RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PNPLA6Q8IY17 1366 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ARPC2O15144 300 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 CSTBP04080 98 aaKnown RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 SHBGP04278 402 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ALAS2P22557 587 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 AHCYP23526 432 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PRKCHP24723 683 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 TROAPQ12815 778 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PTF1AQ7RTS3 328 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 DNAAF5Q86Y56 855 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 SLC30A8Q8IWU4 369 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ZBTB2Q8N680 514 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 RAB2BQ8WUD1 216 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 GTPBP3Q969Y2 492 aaKnown RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 GIMAP5Q96F15 307 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 SLC5A7Q9GZV3 580 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 OR51V1Q9H2C8 321 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ADAM7Q9H2U9 754 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 SPON1Q9HCB6 807 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PLEKHA6Q9Y2H5 1048 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 VWA7Q9Y334 891 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PCDHB1Q9Y5F3 818 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 CDC42BPGQ6DT37 1551 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 MDFIC2A0A1B0GVS7 189 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 CAPN8A6NHC0 703 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ELOA3DA6NLF2 546 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 DISC1C4P0D8 188 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 F8VP50 259 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 SSX4O60224 188 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PDYNP01213 254 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 GPIP06744 558 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 HK1P19367 917 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 DRD4P21917 467 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 HSD11B1P28845 292 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 RPL22P35268 128 aaKnown RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 MAPK12P53778 367 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 RPL6Q02878 288 aaKnown RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 CDK18Q07002 472 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PRKD1Q15139 912 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ELOA3BQ3SY89 546 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 REP15Q6BDI9 236 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 ELOA3Q8NG57 546 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 TNFRSF25Q93038 417 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 CENPNQ96H22 339 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 PHPT1Q9NRX4 125 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-221ENST00000493795 EDARQ9UNE0 448 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 CYP3A7-CYP3A51PA0A087WV96 503 aa7.78□□□□□ -1.16
BRCA1-221ENST00000493795 A0A0G2JLW4 131 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms