RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TRIM10Q9UDY6 481 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 ERRFI1Q9UJM3 462 aaPredicted RBP17.29■□□□□ 0.36
NUP50-218ENST00000493456 SNX7Q9UNH6 387 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 SHOC2Q9UQ13 582 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 WDR37Q9Y2I8 494 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 ZNF711Q9Y462 761 aa17.29■□□□□ 0.36
NUP50-218ENST00000493456 OR5K3A6NET4 321 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 SLC4A1P02730 911 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 SSR1P43307 286 aaKnown RBP17.28■□□□□ 0.36
NUP50-218ENST00000493456 DMPKQ09013 629 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 GPS2Q13227 327 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 KHDC1Q4VXA5 237 aaKnown RBP17.28■□□□□ 0.36
NUP50-218ENST00000493456 MED25Q71SY5 747 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 RBMXL3Q8N7X1 1067 aaKnown RBP17.28■□□□□ 0.36
NUP50-218ENST00000493456 GLIS1Q8NBF1 620 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 CCNYQ8ND76 341 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 GPR150Q8NGU9 434 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 BRSK1Q8TDC3 778 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 ZNF830Q96NB3 372 aaPredicted RBP17.28■□□□□ 0.36
NUP50-218ENST00000493456 SRPK1Q96SB4 655 aaKnown RBP17.28■□□□□ 0.36
NUP50-218ENST00000493456 NUDT9Q9BW91 350 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 MFRPQ9BY79 579 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 GPR63Q9BZJ6 419 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 HSD3B7Q9H2F3 369 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 KCND1Q9NSA2 647 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 GPR83Q9NYM4 423 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 CHMP5Q9NZZ3 219 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 SLC5A6Q9Y289 635 aa17.28■□□□□ 0.36
NUP50-218ENST00000493456 ANKRD17O75179 2603 aaKnown RBP17.28■□□□□ 0.36
NUP50-218ENST00000493456 OTOGQ6ZRI0 2925 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 MYO1FO00160 1098 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 ZBTB11O95625 1053 aaPredicted RBP17.27■□□□□ 0.36
NUP50-218ENST00000493456 BPIP17213 487 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 VAV2P52735 878 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 RRADP55042 308 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 IFI35P80217 286 aaPredicted RBP17.27■□□□□ 0.36
NUP50-218ENST00000493456 GBE1Q04446 702 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 TMEM115Q12893 351 aaPredicted RBP17.27■□□□□ 0.36
NUP50-218ENST00000493456 PDK2Q15119 407 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 RPE65Q16518 533 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 STX1AQ16623 288 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 TMTC4Q5T4D3 741 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 SASS6Q6UVJ0 657 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 CERS6Q6ZMG9 384 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 OOSP2Q86WS3 158 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 MAP7D3Q8IWC1 876 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 ENDOVQ8N8Q3 282 aaKnown RBP17.27■□□□□ 0.36
NUP50-218ENST00000493456 KCTD6Q8NC69 237 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 CPT1BQ92523 772 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 FAF2Q96CS3 445 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 ZNF501Q96CX3 271 aaPredicted RBP17.27■□□□□ 0.36
NUP50-218ENST00000493456 TCTN2Q96GX1 697 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 C5orf34Q96MH7 638 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 TTC25Q96NG3 672 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 SMAD5Q99717 465 aaKnown RBP17.27■□□□□ 0.36
NUP50-218ENST00000493456 NLNQ9BYT8 704 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 ZCCHC2Q9C0B9 1178 aaKnown RBP17.27■□□□□ 0.36
NUP50-218ENST00000493456 CHST8Q9H2A9 424 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 TCFL5Q9UL49 500 aa17.27■□□□□ 0.36
NUP50-218ENST00000493456 MED13Q9UHV7 2174 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 KCNK1O00180 336 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 ZNF185O15231 689 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 PIRTP0C851 137 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 PPIDQ08752 370 aaKnown RBP17.26■□□□□ 0.35
NUP50-218ENST00000493456 NR6A1Q15406 480 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 SLC14A2Q15849 920 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 ZRANB3Q5FWF4 1079 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 AMZ2Q86W34 360 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 DSELQ8IZU8 1212 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 IQCKQ8N0W5 287 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 CNTD1Q8N815 330 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 GDAP1Q8TB36 358 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 LRRN4Q8WUT4 740 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 THAP2Q9H0W7 228 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 FANCEQ9HB96 536 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 RTN4Q9NQC3 1192 aaKnown RBP17.26■□□□□ 0.35
NUP50-218ENST00000493456 HRASLS2Q9NWW9 162 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 C5AR2Q9P296 337 aa17.26■□□□□ 0.35
NUP50-218ENST00000493456 MEN1O00255 615 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 TNFRSF8P28908 595 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 GJC1P36383 396 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 CDK18Q07002 472 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 ZBTB17Q13105 803 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 GPR19Q15760 415 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 ATP13A5Q4VNC0 1218 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 VWA5B1Q5TIE3 1220 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 NT5DC3Q86UY8 548 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 SLC38A9Q8NBW4 561 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 SNRNP40Q96DI7 357 aaKnown RBP17.25■□□□□ 0.35
NUP50-218ENST00000493456 IMP4Q96G21 291 aaKnown RBP17.25■□□□□ 0.35
NUP50-218ENST00000493456 CBX8Q9HC52 389 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 TMEM63CQ9P1W3 806 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 TMPRSS11EQ9UL52 423 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 BTRCQ9Y297 605 aa17.25■□□□□ 0.35
NUP50-218ENST00000493456 DNMT3AQ9Y6K1 912 aaPredicted RBP17.25■□□□□ 0.35
NUP50-218ENST00000493456 CBX6O95503 412 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 CYP1A2P05177 515 aa17.24■□□□□ 0.35
NUP50-218ENST00000493456 MTHFD1P11586 935 aaKnown RBP17.24■□□□□ 0.35
NUP50-218ENST00000493456 SKILP12757 684 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms