RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 RAD9BQ6WBX8 426 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 ASB18Q6ZVZ8 466 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 INTS8Q75QN2 995 aaKnown RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 HAUS6Q7Z4H7 955 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 EXOC3L1Q86VI1 746 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 MUC20Q8N307 709 aaPredicted RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 PHF21AQ96BD5 680 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 TTC14Q96N46 770 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 CENPOQ9BU64 300 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 SPATC1LQ9H0A9 340 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 EBF2Q9HAK2 575 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 LRRC4Q9HBW1 653 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 PLSCR4Q9NRQ2 329 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 ANKEF1Q9NU02 776 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 TCP11L1Q9NUJ3 509 aa3.78□□□□□ -1.8
VTA1-204ENST00000491881 RCC2Q9P258 522 aaKnown RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 RALYQ9UKM9 306 aaKnown RBP3.78□□□□□ -1.8
VTA1-204ENST00000491881 SYNDIG1LA6NDD5 238 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 C15orf62A8K5M9 175 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 H0YIN7 160 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 PLK4O00444 970 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 ADAMDEC1O15204 470 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 P4HA2O15460 535 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 ZWINTO95229 277 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 BMP10O95393 424 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 TPOP07202 933 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 NR2F1P10589 423 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 TRIM21P19474 475 aaKnown RBP3.77□□□□□ -1.81
VTA1-204ENST00000491881 KRT20P35900 424 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 LIG4P49917 911 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 GAS1P54826 345 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 MLLT10P55197 1068 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 GRAPQ13588 217 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 DHRS7BQ6IAN0 325 aaPredicted RBP3.77□□□□□ -1.81
VTA1-204ENST00000491881 ZNF534Q76KX8 674 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 ATG9AQ7Z3C6 839 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 ADGRA1Q86SQ6 560 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 PRPF39Q86UA1 669 aaKnown RBP3.77□□□□□ -1.81
VTA1-204ENST00000491881 SLC9B2Q86UD5 537 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 GBGT1Q8N5D6 347 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 MINDY1Q8N5J2 469 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 SYT2Q8N9I0 419 aaPredicted RBP3.77□□□□□ -1.81
VTA1-204ENST00000491881 AVL9Q8NBF6 648 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 RDM1Q8NG50 284 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 OR52I2Q8NH67 350 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 SPATA20Q8TB22 786 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 LNX1Q8TBB1 728 aaPredicted RBP3.77□□□□□ -1.81
VTA1-204ENST00000491881 TBC1D16Q8TBP0 767 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 SORCS1Q8WY21 1168 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 ZNF622Q969S3 477 aaKnown RBP eCLIP3.77□□□□□ -1.813e-6■■□□□ 12.9
VTA1-204ENST00000491881 FAM84BQ96KN1 310 aaPredicted RBP3.77□□□□□ -1.81
VTA1-204ENST00000491881 ABHD1Q96SE0 405 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 CDRT15Q96T59 188 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 GFI1Q99684 422 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 KLHL4Q9C0H6 718 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 SEMA6AQ9H2E6 1030 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 KCNK15Q9H427 330 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 EVA1AQ9H8M9 152 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 FKRPQ9H9S5 495 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 SLC35C2Q9NQQ7 365 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 LARSQ9P2J5 1176 aaKnown RBP3.77□□□□□ -1.81
VTA1-204ENST00000491881 MORF4L1Q9UBU8 362 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 DLGAP4Q9Y2H0 992 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 FAM169AQ9Y6X4 670 aa3.77□□□□□ -1.81
VTA1-204ENST00000491881 LOC102723996A0A087X1L8 192 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 ZCWPW2A0A1B0GU75 182 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 TULP2O00295 520 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 SH2B2O14492 632 aaPredicted RBP3.76□□□□□ -1.81
VTA1-204ENST00000491881 IPO8O15397 1037 aaKnown RBP3.76□□□□□ -1.81
VTA1-204ENST00000491881 ADAM20O43506 726 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 LDB3O75112 727 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 ABCB1P08183 1280 aaPredicted RBP3.76□□□□□ -1.81
VTA1-204ENST00000491881 DGKAP23743 735 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 AHRP35869 848 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 SIRPAP78324 504 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 POU3F1Q03052 451 aaPredicted RBP3.76□□□□□ -1.81
VTA1-204ENST00000491881 TROAPQ12815 778 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 GAGE2BQ13066 116 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 PLA2G7Q13093 441 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 PRPF4BQ13523 1007 aaKnown RBP3.76□□□□□ -1.81
VTA1-204ENST00000491881 BAATQ14032 418 aaPredicted RBP3.76□□□□□ -1.81
VTA1-204ENST00000491881 TMEM266Q2M3C6 531 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 GAGE2EQ4V326 116 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 ASPRV1Q53RT3 343 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 GARNL3Q5VVW2 1013 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 ALS2CLQ60I27 953 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 NAA16Q6N069 864 aaPredicted RBP3.76□□□□□ -1.81
VTA1-204ENST00000491881 GAGE2AQ6NT46 116 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 FAM171BQ6P995 826 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 Q75L30 129 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 NAGSQ8N159 534 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 OR8H2Q8N162 312 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 AFAP1Q8N556 730 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 POMGNT2Q8NAT1 580 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 POC1AQ8NBT0 407 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 PTPMT1Q8WUK0 201 aaPredicted RBP3.76□□□□□ -1.81
VTA1-204ENST00000491881 LPGAT1Q92604 370 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 LINGO1Q96FE5 620 aa3.76□□□□□ -1.81
VTA1-204ENST00000491881 OXNAD1Q96HP4 312 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms