RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CRHBPP24387 322 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 WNT3AP56704 352 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 IL2P60568 153 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 PWP1Q13610 501 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 RAVER1Q8IY67 606 aaKnown RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ZZZ3Q8IYH5 903 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ARFGAP1Q8N6T3 406 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 DCBLD1Q8N8Z6 715 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 MED30Q96HR3 178 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 CATSPERZQ9NTU4 200 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 TNPO3Q9Y5L0 923 aaKnown RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 NAT1P18440 290 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 CASP3P42574 277 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 BLVRAP53004 296 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 PFKPQ01813 784 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 STYK1Q6J9G0 422 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 SZRD1Q7Z422 152 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 LDB1Q86U70 411 aaPredicted RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 RASAL3Q86YV0 1011 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 ABI1Q8IZP0 508 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 RNFT2Q96EX2 444 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 FRMD6Q96NE9 622 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 VPS35Q96QK1 796 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 ZNF112Q9UJU3 913 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 MRPL42Q9Y6G3 142 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 FABP12A6NFH5 140 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 SEC14L2O76054 403 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 SLITRK5O94991 958 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 SNX4O95219 450 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 MT-CYBP00156 380 aaPredicted RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 UROSP10746 265 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 MYL12AP19105 171 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 CYBRD1Q53TN4 286 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 PNCKQ6P2M8 343 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 TXNDC15Q96J42 360 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 SERHL2Q9H4I8 314 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 SERHLQ9NQF3 203 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 CYTH4Q9UIA0 394 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 MYH9P35579 1960 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 H0YC42 278 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 H3BN98 237 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 ORC5O43913 435 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 ICMTO60725 284 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 DHFRP00374 187 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 MYCP01106 439 aaPredicted RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC6A2P23975 617 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 HTR1EP28566 365 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 DPP6P42658 865 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 RPS3AP61247 264 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 ERVK-8P63133 956 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 CLPPQ16740 277 aaPredicted RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 HMBOX1Q6NT76 420 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 XKRXQ6PP77 449 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 METTL7BQ6UX53 244 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 TFAP2DQ7Z6R9 452 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 TMEM135Q86UB9 458 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 TICAM1Q8IUC6 712 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 TSPEARQ8WU66 669 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 CNPPD1Q9BV87 410 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 HMX2A2RU54 273 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 FFAR3O14843 346 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 GPR42O15529 346 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 PDPK1O15530 556 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 HOXC6P09630 235 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 HTR1BP28222 390 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 RBM20Q5T481 1227 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 KIAA0930Q6ICG6 404 aaPredicted RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 THEM5Q8N1Q8 247 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 DUS2Q9NX74 493 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 FZD10Q9ULW2 581 aa11.17□□□□□ -0.62
CRNKL1-204ENST00000490910 ERN1O75460 977 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 VTNP04004 478 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PGRP06401 933 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 C1QTNF8P60827 252 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 UFM1P61960 85 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 MXD1Q05195 221 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 DDX39BQ13838 428 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 ZNF267Q14586 743 aaPredicted RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 ZSWIM7Q19AV6 140 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 BTBD16Q32M84 506 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC34A3Q8N130 599 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 CADM2Q8N3J6 435 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 SNX18Q96RF0 628 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 HBEGFQ99075 208 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 NUSAP1Q9BXS6 441 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 SNTG1Q9NSN8 517 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 CMTM6Q9NX76 183 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 SCAF8Q9UPN6 1271 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PCDHGA8Q9Y5G5 932 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 STYXL1Q9Y6J8 313 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 FAM155AB1AL88 458 aaPredicted RBP11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 GPR25O00155 361 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 IFNA14P01570 189 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 CD72P21854 359 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 PCSK1P29120 753 aa11.16□□□□□ -0.62
CRNKL1-204ENST00000490910 ERP29P30040 261 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms