RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SLC1A5Q15758 541 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 C9orf43Q8TAL5 461 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-216ENST00000490796 DTX3LQ8TDB6 740 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 APOBEC4Q8WW27 367 aaKnown RBP19.35■□□□□ 0.69
SREBF1-216ENST00000490796 MRGPRX2Q96LB1 330 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 QKIQ96PU8 341 aaKnown RBP eCLIP19.35■□□□□ 0.69
SREBF1-216ENST00000490796 UGT1A7Q9HAW7 530 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 UGT1A10Q9HAW8 530 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 UGT1A8Q9HAW9 530 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 IL17CQ9P0M4 197 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 LNPEPQ9UIQ6 1025 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 TMPRSS11EQ9UL52 423 aa19.35■□□□□ 0.69
SREBF1-216ENST00000490796 hCG_1818297A0A087WSY0 165 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 BUD23O43709 281 aaKnown RBP19.34■□□□□ 0.69
SREBF1-216ENST00000490796 NDUFA10O95299 355 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 CCNYL3P0C7X3 344 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 MSH3P20585 1137 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 DLSTP36957 453 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 ARL4DP49703 201 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 HADHBP55084 474 aaKnown RBP19.34■□□□□ 0.69
SREBF1-216ENST00000490796 SH3BP2P78314 561 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 LONRF2Q1L5Z9 754 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 ITPRIPL1Q6GPH6 555 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 TMEM220Q6QAJ8 160 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 PRSS42Q7Z5A4 293 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 C11orf96Q7Z7L8 435 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 PPP1R3BQ86XI6 285 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 GALNT6Q8NCL4 622 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 RNF31Q96EP0 1072 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 OXNAD1Q96HP4 312 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-216ENST00000490796 HEMGNQ9BXL5 484 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 GOLPH3Q9H4A6 298 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 PDE7BQ9NP56 450 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 PSMD13Q9UNM6 376 aa19.34■□□□□ 0.69
SREBF1-216ENST00000490796 DNMT3AQ9Y6K1 912 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-216ENST00000490796 MACROD2A1Z1Q3 448 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 PRR19A6NJB7 356 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 OR2AG2A6NM03 316 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 C2orf81A6NN90 581 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 KIF1CO43896 1103 aaKnown RBP19.33■□□□□ 0.68
SREBF1-216ENST00000490796 KATNA1O75449 491 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 ANXA9O76027 345 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 KIAA0754O94854 1291 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 CTNNA2P26232 953 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.68
SREBF1-216ENST00000490796 PBLDP30039 288 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-216ENST00000490796 GEMP55040 296 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 ADCY2Q08462 1091 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 XRCC4Q13426 336 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 GPRC6AQ5T6X5 926 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 DAAM2Q86T65 1068 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 RASGEF1AQ8N9B8 481 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 DDHD1Q8NEL9 900 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 ZNF514Q96K75 400 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-216ENST00000490796 TRIM5Q9C035 493 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 IMP3Q9NV31 184 aaKnown RBP19.33■□□□□ 0.68
SREBF1-216ENST00000490796 EPHA6Q9UF33 1036 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 CROTQ9UKG9 612 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 WDR37Q9Y2I8 494 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 HECTD1Q9ULT8 2610 aa19.33■□□□□ 0.68
SREBF1-216ENST00000490796 ARHGAP6O43182 974 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 STK10O94804 968 aaKnown RBP19.32■□□□□ 0.68
SREBF1-216ENST00000490796 MT-ND3P03897 115 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 ZNF28P17035 718 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 FECHP22830 423 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 CYLC1P35663 651 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-216ENST00000490796 CTSCP53634 463 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 TLE1Q04724 770 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 DMPKQ09013 629 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 PRPSAP1Q14558 356 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 RPE65Q16518 533 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 FNBP1LQ5T0N5 605 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 SIDT2Q8NBJ9 832 aaKnown RBP19.32■□□□□ 0.68
SREBF1-216ENST00000490796 ZNF398Q8TD17 642 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 KLHL6Q8WZ60 621 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 UBXN4Q92575 508 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 FICDQ9BVA6 458 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 RAB33BQ9H082 229 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 ZNF71Q9NQZ8 489 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-216ENST00000490796 KCND3Q9UK17 655 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 KCTD3Q9Y597 815 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 PCDHA13Q9Y5I0 950 aa19.32■□□□□ 0.68
SREBF1-216ENST00000490796 APOC4-APOC2K7ER74 178 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 SPAG6O75602 509 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 APOC2P02655 101 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 NELFEP18615 380 aaKnown RBP19.31■□□□□ 0.68
SREBF1-216ENST00000490796 CETN2P41208 172 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 NAP1L1P55209 391 aaKnown RBP19.31■□□□□ 0.68
SREBF1-216ENST00000490796 TBX2Q13207 712 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-216ENST00000490796 NFE2L1Q14494 772 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 CRTC2Q53ET0 693 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-216ENST00000490796 C11orf63Q6NUN7 778 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 ARMC6Q6NXE6 501 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 BBS12Q6ZW61 710 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 DET1Q7L5Y6 550 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 CCDC170Q8IYT3 715 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 BEND7Q8N7W2 519 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-216ENST00000490796 LRRC45Q96CN5 670 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 ANAPC2Q9UJX6 822 aa19.31■□□□□ 0.68
SREBF1-216ENST00000490796 RARRES3Q9UL19 164 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms