RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PCSK4Q6UW60 755 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 BMPERQ8N8U9 685 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 LSM14AQ8ND56 463 aaKnown RBP30.8■■■□□ 2.52
LDB1-204ENST00000490751 TMEM121Q9BTD3 319 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 DDA1Q9BW61 102 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 OGFRQ9NZT2 677 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 FEZ2Q9UHY8 353 aaPredicted RBP30.8■■■□□ 2.52
LDB1-204ENST00000490751 GUCA1BQ9UMX6 200 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 B3GALT1Q9Y5Z6 326 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 SLC30A1Q9Y6M5 507 aa30.8■■■□□ 2.52
LDB1-204ENST00000490751 MN1Q10571 1320 aaPredicted RBP30.79■■■□□ 2.52
LDB1-204ENST00000490751 TK2O00142 265 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 PRB1P04280 392 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 TYRP1P17643 537 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 HALP42357 657 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 ZNF140P52738 457 aaPredicted RBP30.79■■■□□ 2.52
LDB1-204ENST00000490751 TMPRSS15P98073 1019 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 XIAPP98170 497 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 CLCA4Q14CN2 919 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 FNBP1LQ5T0N5 605 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 KIAA1614Q5VZ46 1190 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 KCTD11Q693B1 232 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 DET1Q7L5Y6 550 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 VASH2Q86V25 355 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 PLXDC1Q8IUK5 500 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 DNMT3AQ9Y6K1 912 aaPredicted RBP30.79■■■□□ 2.52
LDB1-204ENST00000490751 ATRXP46100 2492 aa30.79■■■□□ 2.52
LDB1-204ENST00000490751 STMND1H3BQB6 276 aa30.78■■■□□ 2.52
LDB1-204ENST00000490751 KRT86O43790 486 aa30.78■■■□□ 2.52
LDB1-204ENST00000490751 UBXN7O94888 489 aa30.78■■■□□ 2.52
LDB1-204ENST00000490751 PBLDP30039 288 aaPredicted RBP30.78■■■□□ 2.52
LDB1-204ENST00000490751 GFERP55789 205 aa30.78■■■□□ 2.52
LDB1-204ENST00000490751 NFE2L1Q14494 772 aa30.78■■■□□ 2.52
LDB1-204ENST00000490751 TAF1BQ53T94 588 aaPredicted RBP30.78■■■□□ 2.52
LDB1-204ENST00000490751 MANEAQ5SRI9 462 aa30.78■■■□□ 2.52
LDB1-204ENST00000490751 FAM83HQ6ZRV2 1179 aaPredicted RBP30.78■■■□□ 2.52
LDB1-204ENST00000490751 ZNF514Q96K75 400 aaPredicted RBP30.78■■■□□ 2.52
LDB1-204ENST00000490751 SLC40A1Q9NP59 571 aa30.78■■■□□ 2.52
LDB1-204ENST00000490751 AMD1P17707 334 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 RAB15P59190 212 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 GPR18Q14330 331 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 P3H1Q32P28 736 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 SEL1L2Q5TEA6 688 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 ANKS6Q68DC2 871 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 RBM12BQ8IXT5 1001 aaKnown RBP30.77■■■□□ 2.52
LDB1-204ENST00000490751 BEND7Q8N7W2 519 aaPredicted RBP30.77■■■□□ 2.52
LDB1-204ENST00000490751 JPH3Q8WXH2 748 aaPredicted RBP30.77■■■□□ 2.52
LDB1-204ENST00000490751 ATG4AQ8WYN0 398 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 SGF29Q96ES7 293 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 ASPSCR1Q9BZE9 553 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 LRRC40Q9H9A6 602 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 CRLS1Q9UJA2 301 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 PSMD13Q9UNM6 376 aa30.77■■■□□ 2.52
LDB1-204ENST00000490751 LDB2O43679 373 aa30.76■■■□□ 2.51
LDB1-204ENST00000490751 HADHAP40939 763 aa30.76■■■□□ 2.51
LDB1-204ENST00000490751 DCAF12Q5T6F0 453 aa30.76■■■□□ 2.51
LDB1-204ENST00000490751 TAB3Q8N5C8 712 aaPredicted RBP30.76■■■□□ 2.51
LDB1-204ENST00000490751 NAT14Q8WUY8 206 aa30.76■■■□□ 2.51
LDB1-204ENST00000490751 TTC9Q92623 222 aa30.76■■■□□ 2.51
LDB1-204ENST00000490751 C19orf43Q9BQ61 176 aa30.76■■■□□ 2.51
LDB1-204ENST00000490751 CCL22O00626 93 aa30.75■■■□□ 2.51
LDB1-204ENST00000490751 ARHGAP6O43182 974 aa30.75■■■□□ 2.51
LDB1-204ENST00000490751 C9P02748 559 aa30.75■■■□□ 2.51
LDB1-204ENST00000490751 MC2RQ01718 297 aa30.75■■■□□ 2.51
LDB1-204ENST00000490751 RSC1A1Q92681 617 aa30.75■■■□□ 2.51
LDB1-204ENST00000490751 ULK4Q96C45 1275 aa30.75■■■□□ 2.51
LDB1-204ENST00000490751 AGAP14A8MT82 685 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 ANKRD34CP0C6C1 535 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 TPH1P17752 444 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 ITGALP20701 1170 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 GPR150Q8NGU9 434 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 DNAJC1Q96KC8 554 aaKnown RBP30.74■■■□□ 2.51
LDB1-204ENST00000490751 C9orf72Q96LT7 481 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 TGM7Q96PF1 710 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 CTRCQ99895 268 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 FAM96AQ9H5X1 160 aa30.74■■■□□ 2.51
LDB1-204ENST00000490751 MGAT4DA6NG13 374 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 AP2A1O95782 977 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 CAPZBP47756 277 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 ATP1A2P50993 1020 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 RPE65Q16518 533 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 BCL7AQ4VC05 210 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 METRNLQ641Q3 311 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 SNX20Q7Z614 316 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 NXPE1Q8N323 547 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 RTP4Q96DX8 246 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 WBP1Q96G27 269 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 DCUN1D1Q96GG9 259 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 TEFMQ96QE5 360 aaKnown RBP30.73■■■□□ 2.51
LDB1-204ENST00000490751 PIH1D1Q9NWS0 290 aaKnown RBP30.73■■■□□ 2.51
LDB1-204ENST00000490751 FAM8A1Q9UBU6 413 aa30.73■■■□□ 2.51
LDB1-204ENST00000490751 ATMQ13315 3056 aa30.72■■■□□ 2.51
LDB1-204ENST00000490751 CAPN5O15484 640 aaPredicted RBP30.72■■■□□ 2.51
LDB1-204ENST00000490751 PSMD3O43242 534 aa30.72■■■□□ 2.51
LDB1-204ENST00000490751 RALBP11234 206 aa30.72■■■□□ 2.51
LDB1-204ENST00000490751 MC4RP32245 332 aa30.72■■■□□ 2.51
LDB1-204ENST00000490751 LEPRP48357 1165 aaKnown RBP30.72■■■□□ 2.51
LDB1-204ENST00000490751 SEPT6Q14141 434 aa30.72■■■□□ 2.51
LDB1-204ENST00000490751 SLC13A5Q86YT5 568 aaPredicted RBP30.72■■■□□ 2.51
LDB1-204ENST00000490751 UBE2Q2Q8WVN8 375 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms