RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	EPHA4	P54764	986 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	PCBP4	P57723	403 aa	Known RBP	10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	UBE2I	P63279	158 aa	Known RBP	10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	BCL7A	Q4VC05	210 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	LRRC69	Q6ZNQ3	347 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	TMPRSS9	Q7Z410	1059 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	SLITRK4	Q8IW52	837 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	RBM12B	Q8IXT5	1001 aa	Known RBP	10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	BEND7	Q8N7W2	519 aa	Predicted RBP	10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	PPHLN1	Q8NEY8	458 aa	Known RBP	10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	SNIP1	Q8TAD8	396 aa	Known RBP	10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	ACTRT1	Q8TDG2	376 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	COG1	Q8WTW3	980 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	CXorf40B	Q96DE9	158 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	RANBP9	Q96S59	729 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	EPB41L1	Q9H4G0	881 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	UCK1	Q9HA47	277 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	POT1	Q9NUX5	634 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	ZDHHC3	Q9NYG2	299 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	ACSL5	Q9ULC5	683 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	RIMKLB	Q9ULI2	386 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	SNX12	Q9UMY4	172 aa		10.89	□□□□□ -0.67
GGA1-222	ENST00000489772	ASXL3	Q9C0F0	2248 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	DSP	P15924	2871 aa	Known RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772		A0A087WV48	116 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TRBV5-4	A0A0C4DH59	114 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	IGHV5-10-1	A0A0J9YXX1	117 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	CCDC78	A2IDD5	438 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	LILRA5	A6NI73	299 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	OR52A4P	A6NMU1	304 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	CES2	O00748	559 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	HGS	O14964	777 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TLX3	O43711	291 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	ITGA2B	P08514	1039 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	HOXB3	P14651	431 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	BRAF	P15056	766 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	PSMA3	P25788	255 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	EIF2S3	P41091	472 aa	Known RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	SLC19A1	P41440	591 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	MAPK9	P45984	424 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	LIMK2	P53671	638 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	SESN2	P58004	480 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	CDK16	Q00536	496 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	CACNA1B	Q00975	2339 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	GPS1	Q13098	491 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TRA2A	Q13595	282 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	NFE2L1	Q14494	772 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	CLCA4	Q14CN2	919 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TRIP13	Q15645	432 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	METRNL	Q641Q3	311 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TMEM71	Q6P5X7	295 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	WDR74	Q6RFH5	385 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TMEM26	Q6ZUK4	368 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	SERPINA9	Q86WD7	417 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	ZNF248	Q8NDW4	579 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	OR13J1	Q8NGT2	312 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	OR2L2	Q8NH16	312 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	NCSTN	Q92542	709 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	PEX13	Q92968	403 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	10.88	□□□□□ -0.67	2e-9	■■■■□ 20.4
GGA1-222	ENST00000489772	PRR11	Q96HE9	360 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	LINC00615	Q96LM1	132 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	CCDC74B	Q96LY2	380 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TTC1	Q99614	292 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	IL22	Q9GZX6	179 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	VPS37B	Q9H9H4	285 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	SLC40A1	Q9NP59	571 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	ASCL3	Q9NQ33	180 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	BFAR	Q9NZS9	450 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	PISD	Q9UG56	409 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	WDR37	Q9Y2I8	494 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	TCAF1	Q9Y4C2	921 aa		10.88	□□□□□ -0.67
GGA1-222	ENST00000489772	BPTF	Q12830	3046 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	IGLV3-16	A0A075B6K0	115 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	CCDC162P	A2VCL2	907 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	PMS2P1	A4D2B8	440 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	USP27X	A6NNY8	438 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	AGRP	O00253	132 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	KRT37	O76014	449 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	AP2A2	O94973	939 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	KRT14	P02533	472 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	THRA	P10827	490 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	HGF	P14210	728 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	TCP1	P17987	556 aa	Known RBP	10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	TPSB2	P20231	275 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	MPST	P25325	297 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	CSF2RB	P32927	897 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	COIL	P38432	576 aa	Predicted RBP	10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	NSG1	P42857	185 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	NPY2R	P49146	381 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	PRLHR	P49683	370 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	VPS41	P49754	854 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	CDKN1C	P49918	316 aa	Predicted RBP	10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	ARSD	P51689	593 aa		10.87	□□□□□ -0.67
GGA1-222	ENST00000489772	GNG11	P61952	73 aa		10.87	□□□□□ -0.67

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