RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 LSMEM1Q8N8F7 131 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 ZNF441Q8N8Z8 693 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 LMO3Q8TAP4 145 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 CDRT15Q96T59 188 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 GFI1Q99684 422 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 SYT17Q9BSW7 474 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 C1QTNF4Q9BXJ3 329 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 SPATC1LQ9H0A9 340 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 MMP27Q9H306 513 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 SLC35C2Q9NQQ7 365 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 TCP11L1Q9NUJ3 509 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 RCC2Q9P258 522 aaKnown RBP3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 LARSQ9P2J5 1176 aaKnown RBP3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 OR2W1Q9Y3N9 320 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 TMEM184BQ9Y519 407 aaPredicted RBP3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 FAM169AQ9Y6X4 670 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 YEATS2Q9ULM3 1422 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 CGNL1Q0VF96 1302 aa3.42□□□□□ -1.86
AC055855.1-201ENST00000489563 IGHV4OR15-8A0A075B7B6 117 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 A0A1W2PP11 408 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 DENND3A2RUS2 1198 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 OR5K3A6NET4 321 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 C4orf47A7E2U8 309 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 PLK4O00444 970 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 ACOT8O14734 319 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 IPO8O15397 1037 aaKnown RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 PPP1R3DO95685 299 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 BCL10O95999 233 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 FAM106CPP0CH98 169 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 TGFB3P10600 412 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 VPREB1P12018 145 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 CDH1P12830 882 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 NR2F2P24468 414 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 SNRPEP62304 92 aaKnown RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 EEF1A2Q05639 463 aaKnown RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 CXCL9Q07325 125 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 BAATQ14032 418 aaPredicted RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 TMEM266Q2M3C6 531 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 C9orf57Q5W0N0 161 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 DHRS7BQ6IAN0 325 aaPredicted RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 OR7E24Q6IFN5 339 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 RAD9BQ6WBX8 426 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 ASB18Q6ZVZ8 466 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 PLEKHM3Q6ZWE6 761 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 ATG9AQ7Z3C6 839 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 HAUS6Q7Z4H7 955 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 ADGRA1Q86SQ6 560 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 LDB1Q86U70 411 aaPredicted RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 GALNT13Q8IUC8 556 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 GUF1Q8N442 669 aaKnown RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 MINDY1Q8N5J2 469 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 C1orf52Q8N6N3 182 aaKnown RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 POMGNT2Q8NAT1 580 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 BBS10Q8TAM1 723 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 TBC1D16Q8TBP0 767 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 PTPMT1Q8WUK0 201 aaPredicted RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 TMEM255BQ8WV15 326 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 SNRNP27Q8WVK2 155 aaKnown RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 PHF21AQ96BD5 680 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 PTERQ96BW5 349 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 TMCO6Q96DC7 493 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 ERP27Q96DN0 273 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 IL17FQ96PD4 163 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 ABHD1Q96SE0 405 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 NEURL2Q9BR09 285 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 MRPL1Q9BYD6 325 aaKnown RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 CSTL1Q9H114 145 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 SEMA6AQ9H2E6 1030 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 SLCO5A1Q9H2Y9 848 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 KCNK15Q9H427 330 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 LRRC4Q9HBW1 653 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 RALYQ9UKM9 306 aaKnown RBP3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 PCDHAC2Q9Y5I4 1007 aa3.41□□□□□ -1.86
AC055855.1-201ENST00000489563 USP9XQ93008 2570 aaPredicted RBP3.4□□□□□ -1.86
AC055855.1-201ENST00000489563 LOC102723996A0A087X1L8 192 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 GPR75-ASB3A0A0A6YYF3 556 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 C15orf62A8K5M9 175 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 ANKRD66B4E2M5 251 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 TMEM178BH3BS89 294 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 NACADO15069 1562 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 BUD23O43709 281 aaKnown RBP3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 PLOD3O60568 738 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 WDR1O75083 606 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 LDB3O75112 727 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 BMP10O95393 424 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 ADRB2P07550 413 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 ABCB1P08183 1280 aaPredicted RBP3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 KRT19P08727 400 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 FGF3P11487 239 aaPredicted RBP3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 HLA-DOBP13765 273 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 SIRPAP78324 504 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 COASYQ13057 564 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 ALS2CLQ60I27 953 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 CAPRIN2Q6IMN6 1127 aaKnown RBP3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 SPSB3Q6PJ21 355 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 TUBA1AQ71U36 451 aa3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 RBM23Q86U06 439 aaKnown RBP3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 MUC20Q8N307 709 aaPredicted RBP3.4□□□□□ -1.87
AC055855.1-201ENST00000489563 FBXO39Q8N4B4 442 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms