RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 ERCC6LQ2NKX8 1250 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 TYSND1Q2T9J0 566 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 CTSL3PQ5NE16 218 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 MRNIPQ6NTE8 343 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 CNSTQ6PJW8 725 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 CERS6Q6ZMG9 384 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 PIP4P1Q86T03 277 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 GKN2Q86XP6 184 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 PALM2Q8IXS6 379 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 IFT20Q8IY31 132 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 SLC35F3Q8IY50 421 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 KYQ8NBH2 561 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 GPR150Q8NGU9 434 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 OR4C6Q8NH72 309 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 UHMK1Q8TAS1 419 aaKnown RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 GSDMBQ8TAX9 411 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 LPGAT1Q92604 370 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 FMO2Q99518 471 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 NAT9Q9BTE0 207 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 GSDMCQ9BYG8 508 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 ZCCHC2Q9C0B9 1178 aaKnown RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 P2RY12Q9H244 342 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 DPEP2Q9H4A9 486 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 RMI1Q9H9A7 625 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 LRRC4CQ9HCJ2 640 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 SCHIP1Q9P0W5 487 aaPredicted RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 GALPQ9UBC7 116 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 MTRF1LQ9UGC7 380 aaKnown RBP8.15□□□□□ -1.1
SF1-218ENST00000489544 FBXO5Q9UKT4 447 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 PCOLCE2Q9UKZ9 415 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 PSMD13Q9UNM6 376 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 GPR34Q9UPC5 381 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 WDR37Q9Y2I8 494 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 PCDHGB2Q9Y5G2 931 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 CSNK1G3Q9Y6M4 447 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 U3KQA8 63 aa8.15□□□□□ -1.1
SF1-218ENST00000489544 DMXL1Q9Y485 3027 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 SPAARA0A1B0GVQ0 90 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 TCRBV9S1A1TA0A576 114 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 NEMP2A6NFY4 417 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 PRR19A6NJB7 356 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 GPR89AB7ZAQ6 455 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 CFAP99D6REC4 459 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 PRMT5O14744 637 aaPredicted RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 FLRT2O43155 660 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 NOBOXO60393 691 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 NIPSNAP2O75323 286 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 TRIM16O95361 564 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 C1QAP02745 245 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 GPR89BP0CG08 455 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 OGNP20774 298 aaKnown RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 NSG1P42857 185 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 GRK6P43250 576 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 ID4P47928 161 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 PREPP48147 710 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 TTPAP49638 278 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 VSNL1P62760 191 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 ARHGAP8P85298 464 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 MGAT5Q09328 741 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 SLC14A1Q13336 389 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 CUL1Q13616 776 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 CLCA4Q14CN2 919 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 BCL7AQ4VC05 210 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 CCDC157Q569K6 752 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 AARS2Q5JTZ9 985 aaKnown RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 C6orf132Q5T0Z8 1188 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 TEDDM1Q5T9Z0 273 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 LYPLAL1Q5VWZ2 237 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 ARMC3Q5W041 872 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 ZNF549Q6P9A3 640 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 PACS1Q6VY07 963 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 C3orf62Q6ZUJ4 267 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 SDCCAG8Q86SQ7 713 aaPredicted RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 AMZ2Q86W34 360 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 ZNF761Q86XN6 746 aaPredicted RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 CCNJLQ8IV13 435 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 CFAP206Q8IYR0 622 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 NAGSQ8N159 534 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 FSTL5Q8N475 847 aaPredicted RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 C2CD4AQ8NCU7 369 aaPredicted RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 ZDHHC1Q8WTX9 485 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 ATXN7L3BQ96GX2 97 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 CNDP2Q96KP4 475 aaKnown RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 APOLD1Q96LR9 279 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 BIRC8Q96P09 236 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 NDNQ99608 321 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 TIMM29Q9BSF4 260 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 CDC42EP4Q9H3Q1 356 aaKnown RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 VPS37BQ9H9H4 285 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 SARS2Q9NP81 518 aaKnown RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 NLGN3Q9NZ94 848 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 MOCS1Q9NZB8 636 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 NINJ2Q9NZG7 142 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 TSR3Q9UJK0 312 aaKnown RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 PSAT1Q9Y617 370 aa8.14□□□□□ -1.11
SF1-218ENST00000489544 CFAP20Q9Y6A4 193 aaKnown RBP8.14□□□□□ -1.11
SF1-218ENST00000489544 ARID1BQ8NFD5 2236 aaPredicted RBP8.13□□□□□ -1.11
SF1-218ENST00000489544 CPED1A4D0V7 1026 aa8.13□□□□□ -1.11
SF1-218ENST00000489544 A6NCN8 305 aa8.13□□□□□ -1.11
SF1-218ENST00000489544 MGAT4DA6NG13 374 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms