RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SLC30A1Q9Y6M5 507 aa24.54■■□□□ 1.52
HMGN1-217ENST00000489072 A8MU76 341 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 KCNJ13O60928 360 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 AP2A1O95782 977 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 CCDC175P0C221 793 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 CSTF2P33240 577 aaKnown RBP eCLIP24.53■■□□□ 1.52
HMGN1-217ENST00000489072 ARSDP51689 593 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 NFE2L1Q14494 772 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 FNBP1LQ5T0N5 605 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 ARHGAP40Q5TG30 622 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 LRRC45Q96CN5 670 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 DNAJC1Q96KC8 554 aaKnown RBP24.53■■□□□ 1.52
HMGN1-217ENST00000489072 C19orf43Q9BQ61 176 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 EPB41L1Q9H4G0 881 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 FAM96AQ9H5X1 160 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 POT1Q9NUX5 634 aa24.53■■□□□ 1.52
HMGN1-217ENST00000489072 DNMT3AQ9Y6K1 912 aaPredicted RBP24.53■■□□□ 1.52
HMGN1-217ENST00000489072 SGTAO43765 313 aa24.52■■□□□ 1.52
HMGN1-217ENST00000489072 PBLDP30039 288 aaPredicted RBP24.52■■□□□ 1.52
HMGN1-217ENST00000489072 LONRF2Q1L5Z9 754 aa24.52■■□□□ 1.52
HMGN1-217ENST00000489072 TAAR9Q96RI9 348 aa24.52■■□□□ 1.52
HMGN1-217ENST00000489072 UBL7Q96S82 380 aaPredicted RBP24.52■■□□□ 1.52
HMGN1-217ENST00000489072 FRMD8P1Q9BZ68 369 aaPredicted RBP24.52■■□□□ 1.52
HMGN1-217ENST00000489072 B3GNT4Q9C0J1 378 aa24.52■■□□□ 1.52
HMGN1-217ENST00000489072 SLC40A1Q9NP59 571 aa24.52■■□□□ 1.52
HMGN1-217ENST00000489072 PIKFYVEQ9Y2I7 2098 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 LIPCP11150 499 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 TYRP1P17643 537 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 STIP1P31948 543 aaKnown RBP24.51■■□□□ 1.51
HMGN1-217ENST00000489072 HADHAP40939 763 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 GFERP55789 205 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 VAC14Q08AM6 782 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 SRSF6Q13247 344 aaKnown RBP24.51■■□□□ 1.51
HMGN1-217ENST00000489072 SNX1Q13596 522 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 GPR18Q14330 331 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 POU6F1Q14863 301 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 SIX1Q15475 284 aaPredicted RBP24.51■■□□□ 1.51
HMGN1-217ENST00000489072 XKR5Q6UX68 686 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 PRUNE1Q86TP1 453 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 NXPE1Q8N323 547 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 BMPERQ8N8U9 685 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 SNRNP27Q8WVK2 155 aaKnown RBP24.51■■□□□ 1.51
HMGN1-217ENST00000489072 ART4Q93070 314 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 CXorf40BQ96DE9 158 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 ZNF514Q96K75 400 aaPredicted RBP24.51■■□□□ 1.51
HMGN1-217ENST00000489072 KLHL3Q9UH77 587 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 CRLS1Q9UJA2 301 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 PSMD13Q9UNM6 376 aa24.51■■□□□ 1.51
HMGN1-217ENST00000489072 MN1Q10571 1320 aaPredicted RBP24.51■■□□□ 1.51
HMGN1-217ENST00000489072 TEX51A0A1B0GUA7 166 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 EFCAB7A8K855 629 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 PSMD3O43242 534 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 EFSO43281 561 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 UBXN7O94888 489 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 ITGALP20701 1170 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 MC4RP32245 332 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 CDKN1CP49918 316 aaPredicted RBP24.5■■□□□ 1.51
HMGN1-217ENST00000489072 SEPT6Q14141 434 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 BCL7AQ4VC05 210 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 SNX20Q7Z614 316 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 FAM129CQ86XR2 697 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 DTX1Q86Y01 620 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 GPR150Q8NGU9 434 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 ULK4Q96C45 1275 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 ALS2CR12Q96Q35 445 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 CCNL2Q96S94 520 aaPredicted RBP24.5■■□□□ 1.51
HMGN1-217ENST00000489072 ETNK1Q9HBU6 452 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 NLE1Q9NVX2 485 aaPredicted RBP24.5■■□□□ 1.51
HMGN1-217ENST00000489072 WDR70Q9NW82 654 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 ZNF148Q9UQR1 794 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 PCDHGA3Q9Y5H0 932 aa24.5■■□□□ 1.51
HMGN1-217ENST00000489072 B4E171 279 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 K7ENP7 123 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 IFNB1P01574 187 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 PRSS56P0CW18 603 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 ETS1P14921 441 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 TSPAN7P41732 249 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 HALP42357 657 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 RPE65Q16518 533 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 TMEM164Q5U3C3 297 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 METRNLQ641Q3 311 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 INO80CQ6PI98 192 aaPredicted RBP24.49■■□□□ 1.51
HMGN1-217ENST00000489072 GLIS1Q8NBF1 620 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 OR52K1Q8NGK4 314 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 TLR10Q9BXR5 811 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 SLC39A1Q9NY26 324 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 B3GALT1Q9Y5Z6 326 aa24.49■■□□□ 1.51
HMGN1-217ENST00000489072 TRBV5-4A0A0C4DH59 114 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 MGAT4DA6NG13 374 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.48■■□□□ 1.51
HMGN1-217ENST00000489072 H7C0S8 307 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 C9P02748 559 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 CD82P27701 267 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 FASNP49327 2511 aaKnown RBP24.48■■□□□ 1.51
HMGN1-217ENST00000489072 CCDC81Q6ZN84 652 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 PLXDC1Q8IUK5 500 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 RBM12BQ8IXT5 1001 aaKnown RBP24.48■■□□□ 1.51
HMGN1-217ENST00000489072 OR2L2Q8NH16 312 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 RSC1A1Q92681 617 aa24.48■■□□□ 1.51
HMGN1-217ENST00000489072 DCUN1D1Q96GG9 259 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms