RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 RNF148Q8N7C7 305 aa12.02□□□□□ -0.49
HDAC6-230ENST00000488543 GPR26Q8NDV2 337 aa12.02□□□□□ -0.49
HDAC6-230ENST00000488543 HEPHQ9BQS7 1158 aa12.02□□□□□ -0.49
HDAC6-230ENST00000488543 CCDC68Q9H2F9 335 aa12.02□□□□□ -0.49
HDAC6-230ENST00000488543 COG4Q9H9E3 785 aa12.02□□□□□ -0.49
HDAC6-230ENST00000488543 CYP4F12Q9HCS2 524 aa12.02□□□□□ -0.49
HDAC6-230ENST00000488543 S100A14Q9HCY8 104 aa12.02□□□□□ -0.49
HDAC6-230ENST00000488543 PRDM6Q9NQX0 595 aa12.02□□□□□ -0.49
HDAC6-230ENST00000488543 TCF20Q9UGU0 1960 aaKnown RBP12.02□□□□□ -0.49
HDAC6-230ENST00000488543 TSPAN11A1L157 253 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 F8W8V4 182 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 TSPAN12O95859 305 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 ASLP04424 464 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 SPAM1P38567 509 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 PTSQ03393 145 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 ASPHQ12797 758 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 NFATC2Q13469 925 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 C9orf64Q5T6V5 341 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 CERS6Q6ZMG9 384 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 CD200R1Q8TD46 325 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 CSGALNACT1Q8TDX6 532 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 ATOH8Q96SQ7 321 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 DERL2Q9GZP9 239 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 TMEM245Q9H330 911 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 STN1Q9H668 368 aaKnown RBP12.01□□□□□ -0.49
HDAC6-230ENST00000488543 B4GALT6Q9UBX8 382 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 COMMD10Q9Y6G5 202 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 PLXNA2O75051 1894 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 TICRRQ7Z2Z1 1910 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 GLYATL1P3A0A0U1RQE8 302 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 K7EQS6 105 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 PLK4O00444 970 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 PFDN6O15212 129 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 VPS26AO75436 327 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 IPO13O94829 963 aaKnown RBP12.01□□□□□ -0.49
HDAC6-230ENST00000488543 ESR1P03372 595 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 JUNP05412 331 aaKnown RBP12.01□□□□□ -0.49
HDAC6-230ENST00000488543 UGT1A6P19224 532 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 ITGALP20701 1170 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 CD72P21854 359 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 UGT1A1P22309 533 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 UGT1A4P22310 534 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 UGT1A3P35503 534 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 UGT1A5P35504 534 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 GRIA2P42262 883 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 CFAP157Q5JU67 520 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 TMEM198Q66K66 360 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 CCNYL1Q8N7R7 359 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 SIDT2Q8NBJ9 832 aaKnown RBP12.01□□□□□ -0.49
HDAC6-230ENST00000488543 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDAC6-230ENST00000488543 P2RY13Q9BPV8 354 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 BOCQ9BWV1 1114 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 PHF7Q9BWX1 381 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-230ENST00000488543 ILKAPQ9H0C8 392 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-230ENST00000488543 VCXQ9H320 206 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 TFB2MQ9H5Q4 396 aaKnown RBP12.01□□□□□ -0.49
HDAC6-230ENST00000488543 ASB8Q9H765 288 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 SYTL2Q9HCH5 934 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 NCKIPSDQ9NZQ3 722 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 ZDHHC2Q9UIJ5 367 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 APPL1Q9UKG1 709 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 SLC8A2Q9UPR5 921 aa12.01□□□□□ -0.49
HDAC6-230ENST00000488543 A0A1W2PQ67 120 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 AGAP14A8MT82 685 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 PRMT5O14744 637 aaPredicted RBP12□□□□□ -0.49
HDAC6-230ENST00000488543 GRID2O43424 1007 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 MTHFD2P13995 350 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 ETS2P15036 469 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 RPS3P23396 243 aaKnown RBP eCLIP12□□□□□ -0.49
HDAC6-230ENST00000488543 TIE1P35590 1138 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 CLCN7P51798 805 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 PTPN5P54829 565 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 NFKB2Q00653 900 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 TBL3Q12788 808 aaKnown RBP12□□□□□ -0.49
HDAC6-230ENST00000488543 PRKAA1Q13131 559 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 EIF4HQ15056 248 aaKnown RBP12□□□□□ -0.49
HDAC6-230ENST00000488543 HNRNPA1L2Q32P51 320 aaKnown RBP12□□□□□ -0.49
HDAC6-230ENST00000488543 C2orf27AQ580R0 203 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 EPGNQ6UW88 154 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 PIWIL4Q7Z3Z4 852 aaKnown RBP12□□□□□ -0.49
HDAC6-230ENST00000488543 CACUL1Q86Y37 369 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 RHEBL1Q8TAI7 183 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 KCNJ9Q92806 393 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 KIAA1191Q96A73 305 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 CCDC126Q96EE4 140 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 IL36AQ9UHA7 158 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 AK5Q9Y6K8 562 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 PRSS21Q9Y6M0 314 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 IQCF5A8MTL0 148 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 MATN2O00339 956 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 TXNDC9O14530 226 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 AIM2O14862 343 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 APODP05090 189 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 PYGLP06737 847 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 EPHX1P07099 455 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 TIMP2P16035 220 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 ACRV1P26436 265 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 EPHA3P29320 983 aa12□□□□□ -0.49
HDAC6-230ENST00000488543 CTHP32929 405 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms