RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 LIPCP11150 499 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 FGF3P11487 239 aaPredicted RBP17.42■□□□□ 0.38
ITGB1-215ENST00000488494 TPH1P17752 444 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 ITGALP20701 1170 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 HALP42357 657 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 GFERP55789 205 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 DMPKQ09013 629 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 NFE2L1Q14494 772 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 POU6F1Q14863 301 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 TGIF1Q15583 401 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 MICALCLQ6ZW33 695 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 ZFAND4Q86XD8 727 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 LRRC8AQ8IWT6 810 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 ART4Q93070 314 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 ULK4Q96C45 1275 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 SGF29Q96ES7 293 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 ZNF514Q96K75 400 aaPredicted RBP17.42■□□□□ 0.38
ITGB1-215ENST00000488494 FRMD8P1Q9BZ68 369 aaPredicted RBP17.42■□□□□ 0.38
ITGB1-215ENST00000488494 FAM96AQ9H5X1 160 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 OGFRQ9NZT2 677 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 PDP2Q9P2J9 529 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 FAM8A1Q9UBU6 413 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 PSMD13Q9UNM6 376 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 SSUH2Q9Y2M2 353 aa17.42■□□□□ 0.38
ITGB1-215ENST00000488494 SMG1Q96Q15 3661 aaKnown RBP17.42■□□□□ 0.38
ITGB1-215ENST00000488494 MN1Q10571 1320 aaPredicted RBP17.42■□□□□ 0.38
ITGB1-215ENST00000488494 EFCAB7A8K855 629 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 UBXN7O94888 489 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 IFNB1P01574 187 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 TYRP1P17643 537 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 MC4RP32245 332 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 HADHAP40939 763 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 VAC14Q08AM6 782 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 SNX1Q13596 522 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 GPR18Q14330 331 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 CLCA4Q14CN2 919 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 TMEM164Q5U3C3 297 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 NXPE1Q8N323 547 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 GPR150Q8NGU9 434 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 DCUN1D1Q96GG9 259 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 SLC40A1Q9NP59 571 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 OCIAD1Q9NX40 245 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 ZNF148Q9UQR1 794 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 SLC30A1Q9Y6M5 507 aa17.41■□□□□ 0.38
ITGB1-215ENST00000488494 TEX51A0A1B0GUA7 166 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 CCDC78A2IDD5 438 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 KCNJ13O60928 360 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 CD82P27701 267 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 CAPZBP47756 277 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 SRSF6Q13247 344 aaKnown RBP17.4■□□□□ 0.38
ITGB1-215ENST00000488494 BCL7AQ4VC05 210 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 CCDC81Q6ZN84 652 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 ZNF662Q6ZS27 426 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 SNX20Q7Z614 316 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 PLXDC1Q8IUK5 500 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 UBE2Q2Q8WVN8 375 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 RSC1A1Q92681 617 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 TAAR9Q96RI9 348 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 CCNL2Q96S94 520 aaPredicted RBP17.4■□□□□ 0.38
ITGB1-215ENST00000488494 COPS8Q99627 209 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 C19orf43Q9BQ61 176 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 DDA1Q9BW61 102 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 SLC39A1Q9NY26 324 aa17.4■□□□□ 0.38
ITGB1-215ENST00000488494 AGAP14A8MT82 685 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 B4E171 279 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 E7EVH7 732 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 PSMD3O43242 534 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 SGTAO43765 313 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 NRDCO43847 1150 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 RALBP11234 206 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 STIP1P31948 543 aaKnown RBP17.39■□□□□ 0.37
ITGB1-215ENST00000488494 TSPAN7P41732 249 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 CDKN1CP49918 316 aaPredicted RBP17.39■□□□□ 0.37
ITGB1-215ENST00000488494 ARSDP51689 593 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 RPE65Q16518 533 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 ZRANB3Q5FWF4 1079 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 DUS1LQ6P1R4 473 aaKnown RBP17.39■□□□□ 0.37
ITGB1-215ENST00000488494 ARHGAP22Q7Z5H3 698 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 PRUNE1Q86TP1 453 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 LINC00523Q86TU6 105 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 VASH2Q86V25 355 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 RBM12BQ8IXT5 1001 aaKnown RBP17.39■□□□□ 0.37
ITGB1-215ENST00000488494 BMPERQ8N8U9 685 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 CCDC89Q8N998 374 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 OR52K1Q8NGK4 314 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 JPH3Q8WXH2 748 aaPredicted RBP17.39■□□□□ 0.37
ITGB1-215ENST00000488494 TGM7Q96PF1 710 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 B3GNT4Q9C0J1 378 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 IMP3Q9NV31 184 aaKnown RBP17.39■□□□□ 0.37
ITGB1-215ENST00000488494 NLE1Q9NVX2 485 aaPredicted RBP17.39■□□□□ 0.37
ITGB1-215ENST00000488494 PCDHGA3Q9Y5H0 932 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 B3GALT1Q9Y5Z6 326 aa17.39■□□□□ 0.37
ITGB1-215ENST00000488494 DNMT3AQ9Y6K1 912 aaPredicted RBP17.39■□□□□ 0.37
ITGB1-215ENST00000488494 MGAT4DA6NG13 374 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 ERI2A8K979 691 aaKnown RBP17.38■□□□□ 0.37
ITGB1-215ENST00000488494 CFAP99D6REC4 459 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 STMND1H3BQB6 276 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 K7ENP7 123 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 SLC35G4P0C7Q5 338 aa17.38■□□□□ 0.37
ITGB1-215ENST00000488494 PRSS56P0CW18 603 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms