RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 RABEP2Q9H5N1 569 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 ANKEF1Q9NU02 776 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 CLIC5Q9NZA1 410 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 CFDP1Q9UEE9 299 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 GRIP1Q9Y3R0 1128 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 MAGED1Q9Y5V3 778 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM169AQ9Y6X4 670 aa3.65□□□□□ -1.83
HMGB1P36-201ENST00000487709 TRIP12Q14669 1992 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 OR5K3A6NET4 321 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 TMEM189-UBE2V1I3L0A0 370 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 P4HA2O15460 535 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 KCNK5O95279 499 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 SELLP14151 372 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 PRLRP16471 622 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 CORO1AP31146 461 aaKnown RBP3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 AHRP35869 848 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 HOXA1P49639 335 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 HSD17B4P51659 736 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF75DP51815 510 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 COG7P83436 770 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 TROAPQ12815 778 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 KIF5AQ12840 1032 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 UBE2V1Q13404 147 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 GTF2H2Q13888 395 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 BECN1Q14457 450 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 PCLAFQ15004 111 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 PSMD6Q15008 389 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 CCDC96Q2M329 555 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM98BQ52LJ0 330 aaKnown RBP3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 KRTCAP3Q53RY4 240 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 PDSS1Q5T2R2 415 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 GARNL3Q5VVW2 1013 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 ADALQ6DHV7 355 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 LCN10Q6JVE6 187 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 KRT80Q6KB66 452 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 GTF2H2CQ6P1K8 395 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 NRROSQ86YC3 692 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 POGLUT1Q8NBL1 392 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 NEXN-AS1Q8NBZ9 246 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 ACVR1CQ8NER5 493 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 LPGAT1Q92604 370 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 PHF21AQ96BD5 680 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 ERP27Q96DN0 273 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 ABHD8Q96I13 439 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 CNDP2Q96KP4 475 aaKnown RBP3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 IL17FQ96PD4 163 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 GCNAQ96QF7 691 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 CCDC106Q9BWC9 280 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 TXLNGYQ9BZA5 131 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 KLHL4Q9C0H6 718 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 KCNK15Q9H427 330 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 DENND2DQ9H6A0 471 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 TCP11L1Q9NUJ3 509 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 ABCF3Q9NUQ8 709 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 PAG1Q9NWQ8 432 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 LARSQ9P2J5 1176 aaKnown RBP3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 IL17BQ9UHF5 180 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 DDX25Q9UHL0 483 aaKnown RBP3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 TSPYL4Q9UJ04 414 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 PLAGL1Q9UM63 463 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 YIPF1Q9Y548 306 aa3.64□□□□□ -1.83
HMGB1P36-201ENST00000487709 GPR75-ASB3A0A0A6YYF3 556 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 MAGEB17A8MXT2 336 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 SH2B2O14492 632 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 DVL1O14640 695 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PAPSS1O43252 624 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 SSX4O60224 188 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PLOD3O60568 738 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF217O75362 1048 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 ERAL1O75616 437 aaKnown RBP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PDE9AO76083 593 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 BMP10O95393 424 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZBTB11O95625 1053 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 CETPP11597 493 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF12P17014 697 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 HRH2P25021 359 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 DVL1P1P54792 670 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 IFI35P80217 286 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PPP2R2BQ00005 443 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 GAGE5Q13069 117 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 GAGE6Q13070 117 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 GRAPQ13588 217 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 RASA2Q15283 850 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 SNAPC1Q16533 368 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 ACCSLQ4AC99 568 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM76BQ5HYJ3 339 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 TMEM198Q66K66 360 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 OR7E24Q6IFN5 339 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 SPSB3Q6PJ21 355 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PRSS57Q6UWY2 283 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PACS1Q6VY07 963 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 TUBA1AQ71U36 451 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 GALNT13Q8IUC8 556 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 LINC00346Q8IVM7 164 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 ODF3L1Q8IXM7 274 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZNF34Q8IZ26 560 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 C1orf87Q8N0U7 546 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 LSMEM1Q8N8F7 131 aa3.63□□□□□ -1.83
HMGB1P36-201ENST00000487709 PAPD5Q8NDF8 572 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms