RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	P2RY2	P41231	377 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TNFRSF4	P43489	277 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	DHPS	P49366	369 aa	Predicted RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PGD	P52209	483 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	NOP14	P78316	857 aa	Known RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	STIM1	Q13586	685 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	KPNB1	Q14974	876 aa	Known RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	EOGT	Q5NDL2	527 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RRAGB	Q5VZM2	374 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ANO7	Q6IWH7	933 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RHBDF2	Q6PJF5	856 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CCDC73	Q6ZRK6	1079 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	LPCAT2	Q7L5N7	544 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PIM3	Q86V86	326 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GPD1L	Q8N335	351 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CCDC33	Q8N5R6	958 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ALLC	Q8N6M5	410 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	IL17RC	Q8NAC3	791 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ASB5	Q8WWX0	329 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	OTUB2	Q96DC9	234 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	HPDL	Q96IR7	371 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ANKRD36BP1	Q96IX9	119 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	HS6ST2	Q96MM7	605 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	FNBP1	Q96RU3	617 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SYT15	Q9BQS2	421 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CBWD1	Q9BRT8	395 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	NUSAP1	Q9BXS6	441 aa	Known RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MTMR12	Q9C0I1	747 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SLC32A1	Q9H598	525 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	WWOX	Q9NZC7	414 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TBC1D7	Q9P0N9	293 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TBC1D14	Q9P2M4	693 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	DKK4	Q9UBT3	224 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	VPS51	Q9UID3	782 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PILRB	Q9UKJ0	227 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PROCR	Q9UNN8	238 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SMC3	Q9UQE7	1217 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	NEUROG3	Q9Y4Z2	214 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SRPRB	Q9Y5M8	271 aa	Known RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CPQ	Q9Y646	472 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PLXNB3	Q9ULL4	1909 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	APC2	O95996	2303 aa		4.15	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PCDH15	Q96QU1	1955 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ZZEF1	O43149	2961 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	LOC102723971	A0A1B0GUV8	181 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ANTXRL	A6NF34	631 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SRRM3	A6NNA2	597 aa	Predicted RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941		A6NNZ2	444 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941		F8VP50	259 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941		H0Y626	953 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	AP5Z1	O43299	807 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RGS10	O43665	173 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TULP3	O75386	442 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RTN3	O95197	1032 aa	Predicted RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TRIM16	O95361	564 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	KLF8	O95600	359 aa	Predicted RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SERPINF2	P08697	491 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PDGFRB	P09619	1106 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MBL2	P11226	248 aa	Predicted RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	IDE	P14735	1019 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	YWHAQ	P27348	245 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	HTR7	P34969	479 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RDX	P35241	583 aa	Known RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CDKN2A	P42771	156 aa	Known RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PTGER3	P43115	390 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CASP5	P51878	434 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SNRPF	P62306	86 aa	Known RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	GAD2	Q05329	585 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TAF10	Q12962	218 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SEMA3B	Q13214	749 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	HNRNPD	Q14103	355 aa	Known RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	DUOXA1	Q1HG43	343 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MDH1B	Q5I0G3	518 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	HECTD3	Q5T447	861 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SNX30	Q5VWJ9	437 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SLC36A4	Q6YBV0	504 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	STXBP4	Q6ZWJ1	553 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TRAPPC11	Q7Z392	1133 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TRMT11	Q7Z4G4	463 aa	Known RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RABEPK	Q7Z6M1	372 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TTC30A	Q86WT1	665 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	WDR49	Q8IV35	697 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CCDC65	Q8IXS2	484 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	DEFB124	Q8NES8	71 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	OR5B17	Q8NGF7	314 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	CEP76	Q8TAP6	659 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	HMGB4	Q8WW32	186 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	RLN3	Q8WXF3	142 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	OVCA2	Q8WZ82	227 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	MYLPF	Q96A32	169 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	TRMT61A	Q96FX7	289 aa	Known RBP	4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PCED1B	Q96HM7	432 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	SLITRK1	Q96PX8	696 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	PPP1R9B	Q96SB3	815 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	LRRC27	Q9C0I9	530 aa		4.14	□□□□□ -1.75
SNRNP40-205	ENST00000486941	ELOVL4	Q9GZR5	314 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms