RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SERPINA9Q86WD7 417 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 TCEAL8Q8IYN2 117 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 SLC39A11Q8N1S5 342 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 TMEM199Q8N511 208 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 TMEM169Q96HH4 297 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 CDK15Q96Q40 435 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 C1orf50Q9BV19 199 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 C2orf49Q9BVC5 232 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 TRIM4Q9C037 500 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 ZFYVE1Q9HBF4 777 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 INSL5Q9Y5Q6 135 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 CPQQ9Y646 472 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 SLC4A7Q9Y6M7 1214 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 FAM234BA2RU67 622 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 EME2A4GXA9 379 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 ARPC2O15144 300 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 SYNCRIPO60506 623 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 S100BP04271 92 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 ATN1P54259 1190 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 PRKCQQ04759 706 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 CWF19L1Q69YN2 538 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 RETSATQ6NUM9 610 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 IYDQ6PHW0 289 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 ISLR2Q6UXK2 745 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 GOLGA7Q7Z5G4 137 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 APCDD1Q8J025 514 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 RBFAQ8N0V3 343 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 DCBLD1Q8N8Z6 715 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 FNDC5Q8NAU1 212 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 OR6K2Q8NGY2 324 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 NAT14Q8WUY8 206 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 CCDC97Q96F63 343 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 ZNF558Q96NG5 402 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 CIPCQ9C0C6 399 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 SUN2Q9UH99 717 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 EVLQ9UI08 416 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 GNPTGQ9UJJ9 305 aa17.74■□□□□ 0.43
PDLIM7-207ENST00000486828 CCDC85CA6NKD9 419 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 RAD51BO15315 384 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 HTRA2O43464 458 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 CAPN1P07384 714 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 IL10P22301 178 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 PSMA4P25789 261 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 GSK3BP49841 420 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 BCL2L1Q07817 233 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 APOFQ13790 326 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 C18orf21Q32NC0 220 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 TXNDC8Q6A555 127 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 PPP4R4Q6NUP7 873 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 ZBTB49Q6ZSB9 765 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 SNX20Q7Z614 316 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 PDPRQ8NCN5 879 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 DNAJB14Q8TBM8 379 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 FAM110BQ8TC76 370 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 BHMTQ93088 406 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 PRPF18Q99633 342 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 ALG2Q9H553 416 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 IL21Q9HBE4 155 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 HEBP1Q9NRV9 189 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 PADI4Q9UM07 663 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 AURKCQ9UQB9 309 aa17.73■□□□□ 0.43
PDLIM7-207ENST00000486828 C1orf232A0A0U1RR37 186 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 OR7A17O14581 309 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 FFAR2O15552 330 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 SMAD6O43541 496 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 TRBC1P01850 177 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 URODP06132 367 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 ITGALP20701 1170 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 IL12AP29459 219 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 CA5AP35218 305 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 MAPK8P45983 427 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 CSNK1DP48730 415 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 RGS4P49798 205 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 EEFSECP57772 596 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 NFATC2Q13469 925 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 GTF2H2Q13888 395 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 RABL3Q5HYI8 236 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 GTF2H2CQ6P1K8 395 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 SLC39A5Q6ZMH5 540 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 CARM1Q86X55 608 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 ZFAND4Q86XD8 727 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 PTRH1Q86Y79 214 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 SFRP1Q8N474 314 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 CHCHD4Q8N4Q1 142 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 METTL6Q8TCB7 284 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 PROKR1Q8TCW9 393 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 ACDQ96AP0 544 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 PAWRQ96IZ0 340 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 BOCQ9BWV1 1114 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 TRIM8Q9BZR9 551 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 ASB8Q9H765 288 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 TSR3Q9UJK0 312 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 RNF11Q9Y3C5 154 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 COMMD3-BMI1R4GMX3 469 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 TRBV5-4A0A0C4DH59 114 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 DYTNA2CJ06 578 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 GRXCR2A6NFK2 248 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 GLUD1P00367 558 aa17.72■□□□□ 0.43
PDLIM7-207ENST00000486828 NPPAP01160 153 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms