RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 PANX1Q96RD7 426 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 ASF1AQ9Y294 204 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 GLYATQ6IB77 296 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 GPR141Q7Z602 305 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 HOMEZQ8IX15 550 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 OR2AP1Q8NGE2 309 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 OSCP1Q8WVF1 389 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 SCAMP4Q969E2 229 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 ACDQ96AP0 544 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 MTERF1Q99551 399 aaKnown RBP13.07□□□□□ -0.32
HMGN1-216ENST00000486741 CRISPLD1Q9H336 500 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 FNIP2Q9P278 1114 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 MYRFQ9Y2G1 1151 aa13.07□□□□□ -0.32
HMGN1-216ENST00000486741 A0A088AWK7 358 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 KERAO60938 352 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 FCGR1AP12314 374 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 GRB7Q14451 532 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 FAM174BQ3ZCQ3 159 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 ARSIQ5FYB1 569 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 KDELC1Q6UW63 502 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 RRM2BQ7LG56 351 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 GPR180Q86V85 440 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 P3H2Q8IVL5 708 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 TMEM132CQ8N3T6 1108 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 TMEM74Q96NL1 305 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 CASD1Q96PB1 797 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 C11orf84Q9BUA3 381 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-216ENST00000486741 SLC9A3R1O14745 358 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-216ENST00000486741 PABPC1P11940 636 aaKnown RBP13.06□□□□□ -0.32
HMGN1-216ENST00000486741 MAGEA3P43357 314 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 UFM1P61960 85 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 TEAD2Q15562 447 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 ZCCHC8Q6NZY4 707 aaKnown RBP13.06□□□□□ -0.32
HMGN1-216ENST00000486741 CLVS1Q8IUQ0 354 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-216ENST00000486741 EGFL6Q8IUX8 553 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 CFAP206Q8IYR0 622 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 CANT1Q8WVQ1 401 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 C9orf16Q9BUW7 83 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 TMEM165Q9HC07 324 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 DEC1Q9P2X7 70 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 PTPN2P17706 415 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 PRDX6P30041 224 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 CYP4F2P78329 520 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 BLMHQ13867 455 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 OR4D1Q15615 310 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 RABL3Q5HYI8 236 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 LRRC66Q68CR7 880 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-216ENST00000486741 CBR4Q8N4T8 237 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 ASZ1Q8WWH4 475 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 ROGDIQ9GZN7 287 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 ALG2Q9H553 416 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 TRPC4Q9UBN4 977 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 CORO1CQ9ULV4 474 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-216ENST00000486741 CLCA2Q9UQC9 943 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 LOXHD1Q8IVV2 1947 aa13.06□□□□□ -0.32
HMGN1-216ENST00000486741 RFXANKO14593 260 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 MUSKO15146 869 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 PAPSS2O95340 614 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 EPOP01588 193 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 ATF6P18850 670 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 TPP2P29144 1249 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 CASP9P55211 416 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 DEFB103AP81534 67 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 ILF2Q12905 390 aaKnown RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 SEMA3BQ13214 749 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 CHIT1Q13231 466 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 SGCGQ13326 291 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 COL9A2Q14055 689 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 LY6G5CQ5SRR4 150 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 LPCAT2Q7L5N7 544 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 GRASPQ7Z6J2 395 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 TMPRSS11BQ86T26 416 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 KLHL23Q8NBE8 558 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 OR2T12Q8NG77 320 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 ZCCHC2Q9C0B9 1178 aaKnown RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 RIBC2Q9H4K1 309 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 UTRNP46939 3433 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 C16orf96A6NNT2 1141 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 PDLIM1O00151 329 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 CD1DP15813 335 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 CRATP43155 626 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 DLG1Q12959 904 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 TGFBIQ15582 683 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 UNC50Q53HI1 259 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 SNX20Q7Z614 316 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 ISCA2Q86U28 154 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 PIANPQ8IYJ0 282 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 OR2T34Q8NGX1 318 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 OR2T3Q8NH03 318 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 OR10A6Q8NH74 314 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 MPP4Q96JB8 637 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 SLC45A3Q96JT2 553 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 HOPXQ9BPY8 73 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 TDRD1Q9BXT4 1180 aaKnown RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 COQ10BQ9H8M1 238 aa13.05□□□□□ -0.32
HMGN1-216ENST00000486741 THG1LQ9NWX6 298 aaKnown RBP13.05□□□□□ -0.32
HMGN1-216ENST00000486741 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms