RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 FAM83HQ6ZRV2 1179 aaPredicted RBP19.2■□□□□ 0.66
SNX5-213ENST00000486039 DET1Q7L5Y6 550 aa19.2■□□□□ 0.66
SNX5-213ENST00000486039 SNX20Q7Z614 316 aa19.2■□□□□ 0.66
SNX5-213ENST00000486039 JAMLQ86YT9 394 aa19.2■□□□□ 0.66
SNX5-213ENST00000486039 AVL9Q8NBF6 648 aa19.2■□□□□ 0.66
SNX5-213ENST00000486039 UCK1Q9HA47 277 aa19.2■□□□□ 0.66
SNX5-213ENST00000486039 CPNE5Q9HCH3 593 aa19.2■□□□□ 0.66
SNX5-213ENST00000486039 CRLS1Q9UJA2 301 aa19.2■□□□□ 0.66
SNX5-213ENST00000486039 LILRA5A6NI73 299 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 H7C0S8 307 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 NVLO15381 856 aaKnown RBP19.19■□□□□ 0.66
SNX5-213ENST00000486039 SGTAO43765 313 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 NRDCO43847 1150 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 C1QL1O75973 258 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 ITGALP20701 1170 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 MC4RP32245 332 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 FDFT1P37268 417 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 MAPK9P45984 424 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 PPM1FP49593 454 aaPredicted RBP19.19■□□□□ 0.66
SNX5-213ENST00000486039 MAPK10P53779 464 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 NFE2L1Q14494 772 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 FNBP1LQ5T0N5 605 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 ARHGAP40Q5TG30 622 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 WDR74Q6RFH5 385 aaPredicted RBP19.19■□□□□ 0.66
SNX5-213ENST00000486039 XKR5Q6UX68 686 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 TMEM26Q6ZUK4 368 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 OR52K1Q8NGK4 314 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 NCSTNQ92542 709 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 USP7Q93009 1102 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 ZNF514Q96K75 400 aaPredicted RBP19.19■□□□□ 0.66
SNX5-213ENST00000486039 POT1Q9NUX5 634 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 NLE1Q9NVX2 485 aaPredicted RBP19.19■□□□□ 0.66
SNX5-213ENST00000486039 AKAP7Q9P0M2 348 aaPredicted RBP19.19■□□□□ 0.66
SNX5-213ENST00000486039 SSUH2Q9Y2M2 353 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 SLC30A1Q9Y6M5 507 aa19.19■□□□□ 0.66
SNX5-213ENST00000486039 ERI2A8K979 691 aaKnown RBP19.18■□□□□ 0.66
SNX5-213ENST00000486039 C9orf172C9J069 976 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 PRAMEF10O60809 474 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 SUN1O94901 812 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 FGGP02679 453 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 ZSCAN5DPP0CG00 497 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 PRSS56P0CW18 603 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 FGF3P11487 239 aaPredicted RBP19.18■□□□□ 0.66
SNX5-213ENST00000486039 PBLDP30039 288 aaPredicted RBP19.18■□□□□ 0.66
SNX5-213ENST00000486039 CXCR5P32302 372 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 GRIA1P42261 906 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 CDKN1CP49918 316 aaPredicted RBP19.18■□□□□ 0.66
SNX5-213ENST00000486039 CLN3Q13286 438 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 SEPT6Q14141 434 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 DRICH1Q6PGQ1 229 aaPredicted RBP19.18■□□□□ 0.66
SNX5-213ENST00000486039 PCSK4Q6UW60 755 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 LINC00523Q86TU6 105 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 TRIM48Q8IWZ4 208 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 NXPE1Q8N323 547 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 STYXQ8WUJ0 223 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 ULK4Q96C45 1275 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 CDKN2AIPNLQ96HQ2 116 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 ZMYND15Q9H091 742 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 SLC40A1Q9NP59 571 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 OGFRQ9NZT2 677 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 FOXJ2Q9P0K8 574 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 ACSL6Q9UKU0 697 aa19.18■□□□□ 0.66
SNX5-213ENST00000486039 TRBV5-4A0A0C4DH59 114 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 MROH6A6NGR9 719 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 ERVH48-1M5A8F1 160 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 CEP104O60308 925 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 PSMA3P25788 255 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 RHDQ02161 417 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 CDH17Q12864 832 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 SEMA5AQ13591 1074 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 BCL7AQ4VC05 210 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 SNAP47Q5SQN1 464 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 METRNLQ641Q3 311 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 ARHGAP22Q7Z5H3 698 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 AGBL5Q8NDL9 886 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 PMEPA1Q969W9 287 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 CXorf40BQ96DE9 158 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 LINC00615Q96LM1 132 aaPredicted RBP19.17■□□□□ 0.66
SNX5-213ENST00000486039 EPB41L1Q9H4G0 881 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 RAB6BQ9NRW1 208 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 OCIAD1Q9NX40 245 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 PAK5Q9P286 719 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 PSMD13Q9UNM6 376 aa19.17■□□□□ 0.66
SNX5-213ENST00000486039 DRG1Q9Y295 367 aaKnown RBP19.17■□□□□ 0.66
SNX5-213ENST00000486039 CCDC78A2IDD5 438 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 GOLGA6L3A6NEY3 463 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 MGAT4DA6NG13 374 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 A8MU76 341 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 CSTF2P33240 577 aaKnown RBP eCLIP19.16■□□□□ 0.66
SNX5-213ENST00000486039 RPL22P35268 128 aaKnown RBP19.16■□□□□ 0.66
SNX5-213ENST00000486039 HALP42357 657 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 ARSDP51689 593 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 VAC14Q08AM6 782 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 GPR18Q14330 331 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 RPE65Q16518 533 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 GPR33Q49SQ1 333 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 CCDC38Q502W7 563 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 ZRANB3Q5FWF4 1079 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 CCDC89Q8N998 374 aa19.16■□□□□ 0.66
SNX5-213ENST00000486039 DNAAF3Q8N9W5 541 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms