RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 NEU3Q9UQ49 428 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 MFHAS1Q9Y4C4 1052 aa9.7□□□□□ -0.86
SND1-213ENST00000486037 MDC1Q14676 2089 aaKnown RBP9.7□□□□□ -0.86
SND1-213ENST00000486037 A8MX80 341 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
SND1-213ENST00000486037 EEF2KO00418 725 aaKnown RBP9.69□□□□□ -0.86
SND1-213ENST00000486037 APOL1O14791 398 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 TTI1O43156 1089 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 LIASO43766 372 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 CREB3O43889 395 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 RECKO95980 971 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 XPAP23025 273 aaPredicted RBP9.69□□□□□ -0.86
SND1-213ENST00000486037 KELP23276 732 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 ARL4AP40617 200 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 ACTR1BP42025 376 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 MAPK9P45984 424 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 FNTAP49354 379 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 ACTR1AP61163 376 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 OTUD4Q01804 1114 aaKnown RBP9.69□□□□□ -0.86
SND1-213ENST00000486037 NFATC2Q13469 925 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 RAPSNQ13702 412 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 DPYSQ14117 519 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 GLE1Q53GS7 698 aaKnown RBP9.69□□□□□ -0.86
SND1-213ENST00000486037 FAM69BQ5VUD6 431 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 NCBP2-AS2Q69YL0 99 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 PNCKQ6P2M8 343 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 CCDC137Q6PK04 289 aaKnown RBP9.69□□□□□ -0.86
SND1-213ENST00000486037 LIPIQ6XZB0 460 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 GDF7Q7Z4P5 450 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 NLRP14Q86W24 1093 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 OR10G6Q8NH81 332 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 SLC35B2Q8TB61 432 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 ACTL9Q8TC94 416 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 SLC38A3Q99624 504 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 MAK16Q9BXY0 300 aaKnown RBP9.69□□□□□ -0.86
SND1-213ENST00000486037 TRIM8Q9BZR9 551 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 LHX9Q9NQ69 397 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 TRNAU1APQ9NX07 287 aaKnown RBP9.69□□□□□ -0.86
SND1-213ENST00000486037 LHX3Q9UBR4 397 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 PCYOX1Q9UHG3 505 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 LNPEPQ9UIQ6 1025 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 DNPEPQ9ULA0 475 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 ATP8A1Q9Y2Q0 1164 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 VPS13CQ709C8 3753 aa9.69□□□□□ -0.86
SND1-213ENST00000486037 A6NL46 340 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 F5H423 210 aaPredicted RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 APOC4-APOC2K7ER74 178 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 LRIG2O94898 1065 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 HEXIM1O94992 359 aaKnown RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 IGSF6O95976 241 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 APOC2P02655 101 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 MYCLP1P12525 358 aaPredicted RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 FASLGP48023 281 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 HCAR3P49019 387 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 TPI1P60174 286 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 RHOAP61586 193 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 DR1Q01658 176 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 GBE1Q04446 702 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 MTA1Q13330 715 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 DHX34Q14147 1143 aaKnown RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 NOMO1Q15155 1222 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 OASLQ15646 514 aaKnown RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 MANEALQ5VSG8 457 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 DRICH1Q6PGQ1 229 aaPredicted RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 RFX8Q6ZV50 586 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 CAMK1DQ8IU85 385 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 ZNF295-AS1Q8N0V1 137 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 SFRP1Q8N474 314 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 OR6C1Q96RD1 312 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 BARD1Q99728 777 aaKnown RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 TRIM51Q9BSJ1 452 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 TBC1D10AQ9BXI6 508 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 PARD6BQ9BYG5 372 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 BRD8Q9H0E9 1235 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 SUV39H2Q9H5I1 410 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 HOMER3Q9NSC5 361 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 TMEM51Q9NW97 253 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 OR12D3Q9UGF7 316 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 PHTF1Q9UMS5 762 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 OSGIN2Q9Y236 505 aa9.68□□□□□ -0.86
SND1-213ENST00000486037 PCYT1BQ9Y5K3 369 aaPredicted RBP9.68□□□□□ -0.86
SND1-213ENST00000486037 ZGRF1Q86YA3 2104 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 CXorf51AA0A1B0GTR3 108 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 HEATR9A2RTY3 570 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 FAM187AA6NFU0 413 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 E2F3O00716 465 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 KDELR3O43731 214 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 MFSD11O43934 449 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 SPAG6O75602 509 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 ERCC2P18074 760 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 ITGA3P26006 1051 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 VARSP26640 1264 aaKnown RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 GARSP41250 739 aaKnown RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 SEPHS1P49903 392 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 SUOXP51687 545 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 NDST2P52849 883 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 EIF3EP60228 445 aaKnown RBP9.67□□□□□ -0.86
SND1-213ENST00000486037 VSNL1P62760 191 aa9.67□□□□□ -0.86
SND1-213ENST00000486037 NRG1Q02297 640 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms