RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DPYSL5Q9BPU6 564 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 SYNDIG1Q9H7V2 258 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 TREX1Q9NSU2 369 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 BFARQ9NZS9 450 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 ZNF624Q9P2J8 865 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-225ENST00000483506 KIF26BQ2KJY2 2108 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 PIKFYVEQ9Y2I7 2098 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 TRBV23OR9-2A0A075B6M9 112 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 A0A1W2PNU3 283 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 CCDC78A2IDD5 438 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 LILRA5A6NI73 299 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 TAF4O00268 1085 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 TMEM63AO94886 807 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 PRSS56P0CW18 603 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 MLNP12872 115 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 VPS41P49754 854 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 INHBCP55103 352 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 SESN2P58004 480 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 SARNPP82979 210 aaKnown RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 CYP4F3Q08477 520 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 EIF3IQ13347 325 aaKnown RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 NFE2L1Q14494 772 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 ST3GAL2Q16842 350 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 KCTD19Q17RG1 926 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 ZNF658BQ4V348 819 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 ANKRD22Q5VYY1 191 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 METRNLQ641Q3 311 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 DET1Q7L5Y6 550 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 TAS2R42Q7RTR8 314 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 TMPRSS9Q7Z410 1059 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 BEND7Q8N7W2 519 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 MCUQ8NE86 351 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 KIFC1Q9BW19 673 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 POLR1BQ9H9Y6 1135 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 POT1Q9NUX5 634 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 KCNK4Q9NYG8 393 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 RNF14Q9UBS8 474 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 ATXN7L1Q9ULK2 861 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-225ENST00000483506 WDR37Q9Y2I8 494 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 PCDHGA8Q9Y5G5 932 aa17.67■□□□□ 0.42
HDAC6-225ENST00000483506 CCDC187A0A096LP49 1063 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 C17orf113A0A1B0GUU1 675 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 OR51F1A6NGY5 319 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 PDZK1P1A8MUH7 402 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 AP2A2O94973 939 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 GOT2P00505 430 aaKnown RBP17.66■□□□□ 0.42
HDAC6-225ENST00000483506 GSTM1P09488 218 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 RPL10P27635 214 aaKnown RBP17.66■□□□□ 0.42
HDAC6-225ENST00000483506 SLC19A1P41440 591 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 NSG1P42857 185 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 GSTM4Q03013 218 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 CLCA4Q14CN2 919 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 LYPLAL1Q5VWZ2 237 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 CERS6Q6ZMG9 384 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 PIM3Q86V86 326 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 CAND1Q86VP6 1230 aaKnown RBP17.66■□□□□ 0.42
HDAC6-225ENST00000483506 RBM12BQ8IXT5 1001 aaKnown RBP17.66■□□□□ 0.42
HDAC6-225ENST00000483506 LSMEM2Q8N112 164 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 OR4L1Q8NH43 312 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 HM13Q8TCT9 377 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.66■□□□□ 0.42
HDAC6-225ENST00000483506 SLC38A3Q99624 504 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 DDX47Q9H0S4 455 aaKnown RBP17.66■□□□□ 0.42
HDAC6-225ENST00000483506 EPB41L1Q9H4G0 881 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 CHRAC1Q9NRG0 131 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 SYBUQ9NX95 663 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 ACSL5Q9ULC5 683 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 ZMIZ1Q9ULJ6 1067 aa17.66■□□□□ 0.42
HDAC6-225ENST00000483506 BRINP1O60477 761 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 MGAT1P26572 445 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 CSF2RBP32927 897 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 HALP42357 657 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 MLLT3P42568 568 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-225ENST00000483506 MAGEA3P43357 314 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 DRG2P55039 364 aaKnown RBP17.65■□□□□ 0.42
HDAC6-225ENST00000483506 GABREP78334 506 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 CRADDP78560 199 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 CFHR1Q03591 330 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 PTK6Q13882 451 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 SEPT7Q16181 437 aaKnown RBP17.65■□□□□ 0.42
HDAC6-225ENST00000483506 AMZ1Q400G9 498 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 MAP9Q49MG5 647 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 ZNF574Q6ZN55 896 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-225ENST00000483506 TMEM26Q6ZUK4 368 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 NAT8LQ8N9F0 302 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 OR4D9Q8NGE8 314 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 OR10G6Q8NH81 332 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 WDR36Q8NI36 951 aaKnown RBP17.65■□□□□ 0.42
HDAC6-225ENST00000483506 NAT14Q8WUY8 206 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 TMEM159Q96B96 161 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 PRR11Q96HE9 360 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-225ENST00000483506 CAPZA3Q96KX2 299 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 RUNDC3BQ96NL0 473 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 NUDT22Q9BRQ3 303 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 FOXP3Q9BZS1 431 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 STRADBQ9C0K7 418 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 XAB2Q9HCS7 855 aaKnown RBP17.65■□□□□ 0.42
HDAC6-225ENST00000483506 SLC40A1Q9NP59 571 aa17.65■□□□□ 0.42
HDAC6-225ENST00000483506 PDP2Q9P2J9 529 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms