RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 B3GNT4Q9C0J1 378 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 POT1Q9NUX5 634 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 SCHIP1Q9P0W5 487 aaPredicted RBP13.64□□□□□ -0.23
VARS-225ENST00000482996 ZKSCAN5Q9Y2L8 839 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 MPSTP25325 297 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 PBLDP30039 288 aaPredicted RBP13.63□□□□□ -0.23
VARS-225ENST00000482996 MC4RP32245 332 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 ETV5P41161 510 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 DRG2P55039 364 aaKnown RBP13.63□□□□□ -0.23
VARS-225ENST00000482996 TMPRSS3P57727 454 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 CDH17Q12864 832 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 LAMB3Q13751 1172 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 CCNG2Q16589 344 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 ZRANB3Q5FWF4 1079 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 SNAP47Q5SQN1 464 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 PPP1R21Q6ZMI0 780 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 DET1Q7L5Y6 550 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 PLXDC1Q8IUK5 500 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 NXPE1Q8N323 547 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 DNAAF3Q8N9W5 541 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 USP7Q93009 1102 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 SGF29Q96ES7 293 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 CRELD1Q96HD1 420 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 FCRL3Q96P31 734 aaPredicted RBP13.63□□□□□ -0.23
VARS-225ENST00000482996 COPS8Q99627 209 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 TLR10Q9BXR5 811 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 PRORYQ9H606 182 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 ETNK1Q9HBU6 452 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 RAB6BQ9NRW1 208 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 NLE1Q9NVX2 485 aaPredicted RBP13.63□□□□□ -0.23
VARS-225ENST00000482996 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 TMEM9Q9P0T7 183 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 PAK5Q9P286 719 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 ZNF624Q9P2J8 865 aaPredicted RBP13.63□□□□□ -0.23
VARS-225ENST00000482996 PDP2Q9P2J9 529 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 ACSL6Q9UKU0 697 aa13.63□□□□□ -0.23
VARS-225ENST00000482996 BPTFQ12830 3046 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 PRAMEF33A0A0G2JMD5 474 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 MGAT4DA6NG13 374 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 OR52A4PA6NMU1 304 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 AGAP14A8MT82 685 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 H7C0S8 307 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 CEP104O60308 925 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 PRAMEF10O60809 474 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 UBXN7O94888 489 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 FGGP02679 453 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 CCL4P13236 92 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 BRAFP15056 766 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 AMD1P17707 334 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 CD82P27701 267 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 CXADRP78310 365 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 NFE2L1Q14494 772 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 SKIDA1Q1XH10 827 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 BCL7AQ4VC05 210 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 DRICH1Q6PGQ1 229 aaPredicted RBP13.62□□□□□ -0.23
VARS-225ENST00000482996 TAS2R42Q7RTR8 314 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 BEND7Q8N7W2 519 aaPredicted RBP13.62□□□□□ -0.23
VARS-225ENST00000482996 OR52K1Q8NGK4 314 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 PDLIM2Q96JY6 352 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 TAAR9Q96RI9 348 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 FAM96AQ9H5X1 160 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 SLC40A1Q9NP59 571 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 HOMER3Q9NSC5 361 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 PIH1D1Q9NWS0 290 aaKnown RBP13.62□□□□□ -0.23
VARS-225ENST00000482996 ZDHHC3Q9NYG2 299 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 ACSL5Q9ULC5 683 aa13.62□□□□□ -0.23
VARS-225ENST00000482996 DRG1Q9Y295 367 aaKnown RBP13.62□□□□□ -0.23
VARS-225ENST00000482996 EFCAB7A8K855 629 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 A8MU76 341 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 B4E171 279 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 CCL22O00626 93 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 SUN1O94901 812 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 TYRP1P17643 537 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 TSPAN7P41732 249 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 CACNG1Q06432 222 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 CLN3Q13286 438 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 SEMA5AQ13591 1074 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 CLCA4Q14CN2 919 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 SIX1Q15475 284 aaPredicted RBP13.61□□□□□ -0.23
VARS-225ENST00000482996 RPE65Q16518 533 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 METRNLQ641Q3 311 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 C4orf22Q6V702 233 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 FAM83HQ6ZRV2 1179 aaPredicted RBP13.61□□□□□ -0.23
VARS-225ENST00000482996 GSTA5Q7RTV2 222 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 GPR155Q7Z3F1 870 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 SERPINA9Q86WD7 417 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 FAM129CQ86XR2 697 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 OR2L2Q8NH16 312 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.61□□□□□ -0.235e-9■■■■□ 23.5
VARS-225ENST00000482996 CDKN2AIPNLQ96HQ2 116 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 LINC00615Q96LM1 132 aaPredicted RBP13.61□□□□□ -0.23
VARS-225ENST00000482996 VPS37BQ9H9H4 285 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 SLC39A1Q9NY26 324 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 KLHL3Q9UH77 587 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 PSMD13Q9UNM6 376 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 WDR37Q9Y2I8 494 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 PCDHB11Q9Y5F2 797 aa13.61□□□□□ -0.23
VARS-225ENST00000482996 ZNF106Q9H2Y7 1883 aaKnown RBP13.61□□□□□ -0.23
VARS-225ENST00000482996 TRBV5-4A0A0C4DH59 114 aa13.6□□□□□ -0.23
VARS-225ENST00000482996 HEATR9A2RTY3 570 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms