RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 COPS8Q99627 209 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 TBC1D10AQ9BXI6 508 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 B3GNT4Q9C0J1 378 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 ETNK1Q9HBU6 452 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 SLC40A1Q9NP59 571 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 RAB6BQ9NRW1 208 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 PIH1D1Q9NWS0 290 aaKnown RBP11.67□□□□□ -0.54
HMGN1-213ENST00000482192 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.67□□□□□ -0.54
HMGN1-213ENST00000482192 TMEM9Q9P0T7 183 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 PAK5Q9P286 719 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 WDR37Q9Y2I8 494 aa11.67□□□□□ -0.54
HMGN1-213ENST00000482192 ADAMTS20P59510 1910 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 ZFHX4Q86UP3 3567 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 PRAMEF33A0A0G2JMD5 474 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 MGAT4DA6NG13 374 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 MROH6A6NGR9 719 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 OR52A4PA6NMU1 304 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 CEP104O60308 925 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 PRAMEF10O60809 474 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 UBXN7O94888 489 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 CCL4P13236 92 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 PBLDP30039 288 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-213ENST00000482192 ETV5P41161 510 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 CLN3Q13286 438 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 LAMB3Q13751 1172 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 NFE2L1Q14494 772 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 CLCA4Q14CN2 919 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 METRNLQ641Q3 311 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 PPP1R21Q6ZMI0 780 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 FAM83HQ6ZRV2 1179 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-213ENST00000482192 PLXDC1Q8IUK5 500 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 BEND7Q8N7W2 519 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-213ENST00000482192 OR52K1Q8NGK4 314 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 OR2L2Q8NH16 312 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 STYXQ8WUJ0 223 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 USP7Q93009 1102 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 LINC00615Q96LM1 132 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-213ENST00000482192 FCRL3Q96P31 734 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-213ENST00000482192 FAM96AQ9H5X1 160 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 PRORYQ9H606 182 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 HOMER3Q9NSC5 361 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 ACSL5Q9ULC5 683 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 DRG1Q9Y295 367 aaKnown RBP11.66□□□□□ -0.54
HMGN1-213ENST00000482192 KNTC1P50748 2209 aa11.66□□□□□ -0.54
HMGN1-213ENST00000482192 MN1Q10571 1320 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-213ENST00000482192 IGLV3-16A0A075B6K0 115 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 TRBV5-4A0A0C4DH59 114 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 HEATR9A2RTY3 570 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 B4E171 279 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 C9orf172C9J069 976 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 APRTP07741 180 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 SLC35G4P0C7Q5 338 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 LIPCP11150 499 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 FGF3P11487 239 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-213ENST00000482192 ATP1B2P14415 290 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-213ENST00000482192 ETS1P14921 441 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 PSMA3P25788 255 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 ACRV1P26436 265 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 CD82P27701 267 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 CXCR5P32302 372 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 TSPAN7P41732 249 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 PRLHRP49683 370 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 CXADRP78310 365 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 CACNG1Q06432 222 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 GPR18Q14330 331 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 RPE65Q16518 533 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 SKIDA1Q1XH10 827 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 ZRANB3Q5FWF4 1079 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 SNAP47Q5SQN1 464 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 GSTA5Q7RTV2 222 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 FAM129CQ86XR2 697 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 GLIS1Q8NBF1 620 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 CDKN2AIPNLQ96HQ2 116 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 TAAR9Q96RI9 348 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 DDA1Q9BW61 102 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 VPS37BQ9H9H4 285 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 EIF2B3Q9NR50 452 aaKnown RBP11.65□□□□□ -0.54
HMGN1-213ENST00000482192 ZDHHC3Q9NYG2 299 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 FOXJ2Q9P0K8 574 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 PSMD13Q9UNM6 376 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 JRKLQ9Y4A0 524 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 PCDHGA3Q9Y5H0 932 aa11.65□□□□□ -0.54
HMGN1-213ENST00000482192 ANKRD11Q6UB99 2663 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-213ENST00000482192 ARHGEF17Q96PE2 2063 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-213ENST00000482192 A8MU76 341 aa11.64□□□□□ -0.55
HMGN1-213ENST00000482192 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-213ENST00000482192 TOX3O15405 576 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-213ENST00000482192 SGTAO43765 313 aa11.64□□□□□ -0.55
HMGN1-213ENST00000482192 ANKRD34CP0C6C1 535 aa11.64□□□□□ -0.55
HMGN1-213ENST00000482192 ZSCAN5DPP0CG00 497 aa11.64□□□□□ -0.55
HMGN1-213ENST00000482192 MTHFD1P11586 935 aaKnown RBP11.64□□□□□ -0.55
HMGN1-213ENST00000482192 TYRP1P17643 537 aa11.64□□□□□ -0.55
HMGN1-213ENST00000482192 AMD1P17707 334 aa11.64□□□□□ -0.55
HMGN1-213ENST00000482192 RPL22P35268 128 aaKnown RBP11.64□□□□□ -0.55
HMGN1-213ENST00000482192 CAPZBP47756 277 aa11.64□□□□□ -0.55
HMGN1-213ENST00000482192 RAB15P59190 212 aa11.64□□□□□ -0.55
HMGN1-213ENST00000482192 CCDC38Q502W7 563 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms