RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 RASGEF1AQ8N9B8 481 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 PLA2G15Q8NCC3 412 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 OR2L2Q8NH16 312 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 RAB3IL1Q8TBN0 382 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 STAG3L4Q8TBR4 150 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 TCP10LQ8TDR4 215 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 GLMNQ92990 594 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 FUBP1Q96AE4 644 aaKnown RBP10.01□□□□□ -0.81
USP39-215ENST00000481409 BIRC7Q96CA5 298 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 MS4A3Q96HJ5 214 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 NECAB3Q96P71 396 aaPredicted RBP10.01□□□□□ -0.81
USP39-215ENST00000481409 SELENOSQ9BQE4 189 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 TIMM29Q9BSF4 260 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 C1QTNF1Q9BXJ1 281 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 TPSD1Q9BZJ3 242 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 MRPL46Q9H2W6 279 aaKnown RBP10.01□□□□□ -0.81
USP39-215ENST00000481409 DPEP2Q9H4A9 486 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 C6orf106Q9H6K1 298 aaPredicted RBP10.01□□□□□ -0.81
USP39-215ENST00000481409 CAB39LQ9H9S4 337 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 MBNL1Q9NR56 388 aaKnown RBP10.01□□□□□ -0.81
USP39-215ENST00000481409 INTS9Q9NV88 658 aaKnown RBP10.01□□□□□ -0.81
USP39-215ENST00000481409 C2orf42Q9NWW7 574 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 ATXN10Q9UBB4 475 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 PRSS21Q9Y6M0 314 aa10.01□□□□□ -0.81
USP39-215ENST00000481409 PIKFYVEQ9Y2I7 2098 aa10□□□□□ -0.81
USP39-215ENST00000481409 UNC80Q8N2C7 3258 aa10□□□□□ -0.81
USP39-215ENST00000481409 SRRM3A6NNA2 597 aaPredicted RBP10□□□□□ -0.81
USP39-215ENST00000481409 PRR5-ARHGAP8B1AHC4 643 aa10□□□□□ -0.81
USP39-215ENST00000481409 GOLGA8RI6L899 631 aa10□□□□□ -0.81
USP39-215ENST00000481409 SLC16A5O15375 505 aa10□□□□□ -0.81
USP39-215ENST00000481409 PHGDHO43175 533 aaKnown RBP10□□□□□ -0.81
USP39-215ENST00000481409 MAP3K13O43283 966 aa10□□□□□ -0.81
USP39-215ENST00000481409 GRID2O43424 1007 aa10□□□□□ -0.81
USP39-215ENST00000481409 PI15O43692 258 aa10□□□□□ -0.81
USP39-215ENST00000481409 SGTAO43765 313 aa10□□□□□ -0.81
USP39-215ENST00000481409 PLIN3O60664 434 aa10□□□□□ -0.81
USP39-215ENST00000481409 LILRB5O75023 590 aa10□□□□□ -0.81
USP39-215ENST00000481409 NIPSNAP2O75323 286 aa10□□□□□ -0.81
USP39-215ENST00000481409 H2AFYO75367 372 aaKnown RBP10□□□□□ -0.81
USP39-215ENST00000481409 GPC4O75487 556 aa10□□□□□ -0.81
USP39-215ENST00000481409 SLCO2B1O94956 709 aa10□□□□□ -0.81
USP39-215ENST00000481409 FSBPO95073 299 aa10□□□□□ -0.81
USP39-215ENST00000481409 ASMTLO95671 621 aa10□□□□□ -0.81
USP39-215ENST00000481409 C8GP07360 202 aa10□□□□□ -0.81
USP39-215ENST00000481409 ENO2P09104 434 aaPredicted RBP10□□□□□ -0.81
USP39-215ENST00000481409 DHRS4L1P0CG22 281 aa10□□□□□ -0.81
USP39-215ENST00000481409 TDGF1P13385 188 aa10□□□□□ -0.81
USP39-215ENST00000481409 TAC1P20366 129 aa10□□□□□ -0.81
USP39-215ENST00000481409 MAT2AP31153 395 aaKnown RBP10□□□□□ -0.81
USP39-215ENST00000481409 CA5AP35218 305 aa10□□□□□ -0.81
USP39-215ENST00000481409 RPA3P35244 121 aaPredicted RBP10□□□□□ -0.81
USP39-215ENST00000481409 ETV4P43268 484 aa10□□□□□ -0.81
USP39-215ENST00000481409 ABCG1P45844 678 aa10□□□□□ -0.81
USP39-215ENST00000481409 BLKP51451 505 aa10□□□□□ -0.81
USP39-215ENST00000481409 THOP1P52888 689 aa10□□□□□ -0.81
USP39-215ENST00000481409 RACK1P63244 317 aaKnown RBP10□□□□□ -0.81
USP39-215ENST00000481409 RPL6Q02878 288 aaKnown RBP10□□□□□ -0.81
USP39-215ENST00000481409 SP140Q13342 867 aa10□□□□□ -0.81
USP39-215ENST00000481409 LRP8Q14114 963 aa10□□□□□ -0.81
USP39-215ENST00000481409 HHATQ5VTY9 493 aa10□□□□□ -0.81
USP39-215ENST00000481409 METTL2BQ6P1Q9 378 aaKnown RBP10□□□□□ -0.81
USP39-215ENST00000481409 PAQR3Q6TCH7 311 aa10□□□□□ -0.81
USP39-215ENST00000481409 LPCAT2Q7L5N7 544 aa10□□□□□ -0.81
USP39-215ENST00000481409 ADAMTSL2Q86TH1 951 aa10□□□□□ -0.81
USP39-215ENST00000481409 CENPLQ8N0S6 344 aaPredicted RBP10□□□□□ -0.81
USP39-215ENST00000481409 MYO1HQ8N1T3 1032 aa10□□□□□ -0.81
USP39-215ENST00000481409 PELI3Q8N2H9 469 aa10□□□□□ -0.81
USP39-215ENST00000481409 CLDN19Q8N6F1 224 aa10□□□□□ -0.81
USP39-215ENST00000481409 BEND7Q8N7W2 519 aaPredicted RBP10□□□□□ -0.81
USP39-215ENST00000481409 MFSD2AQ8NA29 543 aa10□□□□□ -0.81
USP39-215ENST00000481409 DTWD2Q8NBA8 298 aa10□□□□□ -0.81
USP39-215ENST00000481409 ACVR1CQ8NER5 493 aa10□□□□□ -0.81
USP39-215ENST00000481409 OR56A4Q8NGH8 313 aa10□□□□□ -0.81
USP39-215ENST00000481409 HM13Q8TCT9 377 aa10□□□□□ -0.81
USP39-215ENST00000481409 DNASE2BQ8WZ79 361 aa10□□□□□ -0.81
USP39-215ENST00000481409 KIAA1191Q96A73 305 aa10□□□□□ -0.81
USP39-215ENST00000481409 TMEM159Q96B96 161 aa10□□□□□ -0.81
USP39-215ENST00000481409 SGF29Q96ES7 293 aa10□□□□□ -0.81
USP39-215ENST00000481409 WDR92Q96MX6 357 aa10□□□□□ -0.81
USP39-215ENST00000481409 OR2AG1Q9H205 316 aa10□□□□□ -0.81
USP39-215ENST00000481409 CCDC134Q9H6E4 229 aa10□□□□□ -0.81
USP39-215ENST00000481409 GPR27Q9NS67 375 aa10□□□□□ -0.81
USP39-215ENST00000481409 ACSL5Q9ULC5 683 aa10□□□□□ -0.81
USP39-215ENST00000481409 RUVBL2Q9Y230 463 aaKnown RBP10□□□□□ -0.81
USP39-215ENST00000481409 TECTAO75443 2155 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 SLC5A10A0PJK1 596 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 RAD51BO15315 384 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 DNAJC6O75061 913 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 SPAG7O75391 227 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 PROCP04070 461 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 TPBGLP0DKB5 382 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 CD1DP15813 335 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 CHN1P15882 459 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 CREB1P16220 341 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 ZNF8P17098 575 aaPredicted RBP9.99□□□□□ -0.81
USP39-215ENST00000481409 CCR7P32248 378 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 MDH1P40925 334 aaKnown RBP9.99□□□□□ -0.81
USP39-215ENST00000481409 ARHGAP8P85298 464 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 CSHL1Q14406 222 aa9.99□□□□□ -0.81
USP39-215ENST00000481409 ZNF658BQ4V348 819 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms