RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 NET1Q7Z628 596 aaPredicted RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 CPNE9Q8IYJ1 553 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 PELI3Q8N2H9 469 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 NAT16Q8N8M0 369 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 TERB1Q8NA31 727 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 CHST14Q8NCH0 376 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 DDHD1Q8NEL9 900 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 KCNV2Q8TDN2 545 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 AGAP11Q8TF27 550 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 UBTD2Q8WUN7 234 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 EEF1AKMT1Q8WVE0 214 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 ELSPBP1Q96BH3 223 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 C19orf60Q96EN9 201 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 ZNF514Q96K75 400 aaPredicted RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 SPATA16Q9BXB7 569 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 CADM1Q9BY67 442 aaKnown RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 DCLRE1BQ9H816 532 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 EFCAB1Q9HAE3 211 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 FBRSQ9HAH7 460 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 ZBTB26Q9HCK0 441 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 MID1IP1Q9NPA3 183 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 PCDH12Q9NPG4 1184 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 DYRK4Q9NR20 520 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 RIC8BQ9NVN3 520 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 UTP6Q9NYH9 597 aaKnown RBP7.83□□□□□ -1.16
VMA21-203ENST00000477649 PPM1HQ9ULR3 514 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 NUMBLQ9Y6R0 609 aa7.83□□□□□ -1.16
VMA21-203ENST00000477649 ANKRD36A6QL64 1941 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 DYTNA2CJ06 578 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 KLHL33A6NCF5 533 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 NPEPPSL1A6NEC2 478 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 C16orf96A6NNT2 1141 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 BBIP1A8MTZ0 92 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 E9PBE3 544 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 CDC7O00311 574 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 WNT9AO14904 365 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 FFAR2O15552 330 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 KLHL41O60662 606 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 KATNA1O75449 491 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 CDK14O94921 469 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 WDR47O94967 919 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 TRIM16O95361 564 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 ANXA5P08758 320 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 HIST1H2AGP0C0S8 130 aaPredicted RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 ELFN1P0C7U0 828 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 PRSS56P0CW18 603 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 HNRNPLP14866 589 aaKnown RBP eCLIP7.82□□□□□ -1.16
VMA21-203ENST00000477649 PSMC3P17980 439 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 HIST1H2ADP20671 130 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 PIK3R1P27986 724 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 EPHA3P29320 983 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 BMP8BP34820 402 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 VIPR2P41587 438 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 GRIA2P42262 883 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 SH3BP2P78314 561 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 ZNF33BQ06732 778 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 DSG2Q14126 1118 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 UBAP2LQ14157 1087 aaKnown RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 GBX1Q14549 363 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 PDCD2Q16342 344 aaPredicted RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 UGT3A2Q3SY77 523 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 SPATS1Q496A3 300 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 TMEM52BQ4KMG9 183 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 ATP13A5Q4VNC0 1218 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 HENMT1Q5T8I9 393 aaKnown RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 VWA5B1Q5TIE3 1220 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 FAM109BQ6ICB4 259 aaPredicted RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 OGFOD2Q6N063 350 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 SBSNQ6UWP8 590 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 GPRIN3Q6ZVF9 776 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 LARP4Q71RC2 724 aaKnown RBP eCLIP7.82□□□□□ -1.16
VMA21-203ENST00000477649 GET4Q7L5D6 327 aaPredicted RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 TECPR1Q7Z6L1 1165 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 TSPAN33Q86UF1 283 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 PACS2Q86VP3 889 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 GALNT13Q8IUC8 556 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 SCUBE1Q8IWY4 988 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 C12orf76Q8N812 135 aaPredicted RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 RBM15BQ8NDT2 890 aaKnown RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 FAM13CQ8NE31 585 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 GIMAP7Q8NHV1 300 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 MAPK15Q8TD08 544 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 CYB5D2Q8WUJ1 264 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 BTN2A2Q8WVV5 523 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 ASZ1Q8WWH4 475 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 SUSD6Q92537 303 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 JADE3Q92613 823 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 UTP4Q969X6 686 aaKnown RBP7.82□□□□□ -1.16
VMA21-203ENST00000477649 RSPRY1Q96DX4 576 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 HIST1H2AHQ96KK5 128 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 NECTIN4Q96NY8 510 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 LRRC3BQ96PB8 259 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 SMIM14Q96QK8 99 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 OR52B2Q96RD2 323 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 MIPEPQ99797 713 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 HIST1H2AJQ99878 128 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 GDF15Q99988 308 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 H2AFJQ9BTM1 129 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 HGH1Q9BTY7 390 aa7.82□□□□□ -1.16
VMA21-203ENST00000477649 SLC25A23Q9BV35 468 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms