RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 BMPR2Q13873 1038 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 PDE1CQ14123 709 aaPredicted RBP16.66■□□□□ 0.26
EPHB4-204ENST00000477446 ZRANB3Q5FWF4 1079 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 PLA2G2CQ5R387 149 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 CCDC91Q7Z6B0 441 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 BTN2A2Q8WVV5 523 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 C10orf82Q8WW14 230 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 GLYATL1Q969I3 302 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 SKA1Q96BD8 255 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 LRRC37BQ96QE4 947 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 VPS35Q96QK1 796 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 TUBB6Q9BUF5 446 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 FAM96AQ9H5X1 160 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 PHPT1Q9NRX4 125 aaPredicted RBP16.66■□□□□ 0.26
EPHB4-204ENST00000477446 SIRPGQ9P1W8 387 aa16.66■□□□□ 0.26
EPHB4-204ENST00000477446 MTO1Q9Y2Z2 717 aaKnown RBP16.66■□□□□ 0.26
EPHB4-204ENST00000477446 FRYLO94915 3013 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 ADAMTS9Q9P2N4 1935 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 AGAP14A8MT82 685 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 CACNB4O00305 520 aaPredicted RBP16.65■□□□□ 0.26
EPHB4-204ENST00000477446 MAGEC1O60732 1142 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 SLC25A14O95258 325 aaPredicted RBP16.65■□□□□ 0.26
EPHB4-204ENST00000477446 MPOP05164 745 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 PRSS56P0CW18 603 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 MYCLP1P12525 358 aaPredicted RBP16.65■□□□□ 0.26
EPHB4-204ENST00000477446 ITGALP20701 1170 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 ARCN1P48444 511 aaKnown RBP16.65■□□□□ 0.26
EPHB4-204ENST00000477446 THOP1P52888 689 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 C21orf59P57076 290 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 KIAA1024LP59773 190 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 BNC1Q01954 994 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 CACNG1Q06432 222 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 NFATC4Q14934 902 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 TRIM61Q5EBN2 209 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 TEDDM1Q5T9Z0 273 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 KIAA0930Q6ICG6 404 aaPredicted RBP16.65■□□□□ 0.26
EPHB4-204ENST00000477446 SLC23A3Q6PIS1 610 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 AFTPHQ6ULP2 937 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 CDHR3Q6ZTQ4 885 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 SNX20Q7Z614 316 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 TRIM74Q86UV6 250 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 DCP2Q8IU60 420 aaKnown RBP16.65■□□□□ 0.26
EPHB4-204ENST00000477446 NUDCD3Q8IVD9 361 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 FITM2Q8N6M3 262 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 OR4L1Q8NH43 312 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 COX14Q96I36 57 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 C7orf26Q96N11 449 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 RBBP8Q99708 897 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 CAPN10Q9HC96 672 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 FSCN3Q9NQT6 498 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 TXLNGQ9NUQ3 528 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 PCMTD2Q9NV79 361 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 SMOXQ9NWM0 555 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 SLC6A14Q9UN76 642 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 ANKRD6Q9Y2G4 727 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 CACNA1EQ15878 2313 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 TMEM131Q92545 1883 aa16.65■□□□□ 0.26
EPHB4-204ENST00000477446 SPTY2D1-AS1A0A0U1RR47 76 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 BPGMP07738 259 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 ERVK-10P10266 1014 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 PAMP19021 973 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 LIMK2P53671 638 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 NXPH1P58417 271 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 SF3A3Q12874 501 aaKnown RBP eCLIP16.64■□□□□ 0.256e-7■■■■■ 27.5
EPHB4-204ENST00000477446 GPR33Q49SQ1 333 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 PSAPL1Q6NUJ1 521 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 PIANPQ8IYJ0 282 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 GABPB2Q8TAK5 448 aaPredicted RBP16.64■□□□□ 0.25
EPHB4-204ENST00000477446 IL1RAPL1Q9NZN1 696 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 NCDNQ9UBB6 729 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 OAS3Q9Y6K5 1087 aaKnown RBP16.64■□□□□ 0.25
EPHB4-204ENST00000477446 TRBV5-4A0A0C4DH59 114 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 TMEM202A6NGA9 273 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 GOLGA8TH3BQL2 631 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 HNRNPCL1O60812 293 aaKnown RBP16.64■□□□□ 0.25
EPHB4-204ENST00000477446 BGNP21810 368 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 HTR1BP28222 390 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 TYK2P29597 1187 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 MAGEA12P43365 314 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 SERPINB8P50452 374 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 IRX4P78413 519 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 PTK2BQ14289 1009 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 FZD2Q14332 565 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 SMAD1Q15797 465 aaKnown RBP16.64■□□□□ 0.25
EPHB4-204ENST00000477446 KIF19Q2TAC6 998 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 ZNF648Q5T619 568 aaPredicted RBP16.64■□□□□ 0.25
EPHB4-204ENST00000477446 MACC1Q6ZN28 852 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 TAS2R42Q7RTR8 314 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 LCA5Q86VQ0 697 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 KCNMB4Q86W47 210 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 PHYKPLQ8IUZ5 450 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 UNC5BQ8IZJ1 945 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 PNPLA1Q8N8W4 532 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 RMDN2Q96LZ7 410 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 C20orf96Q9NUD7 363 aaPredicted RBP16.64■□□□□ 0.25
EPHB4-204ENST00000477446 CRLS1Q9UJA2 301 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 TMEM98Q9Y2Y6 226 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 SNX11Q9Y5W9 270 aa16.64■□□□□ 0.25
EPHB4-204ENST00000477446 PCDH15Q96QU1 1955 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms