RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PCDHGB2Q9Y5G2 931 aa15.62■□□□□ 0.09
COPS3-207ENST00000477299 U3KQA8 63 aa15.62■□□□□ 0.09
COPS3-207ENST00000477299 PRAMEF33A0A0G2JMD5 474 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 FOXD2O60548 495 aaPredicted RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 SNX2O60749 519 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 CBFA2T3O75081 653 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 AHSGP02765 367 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 ANXA6P08133 673 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 OGNP20774 298 aaKnown RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 RPL10P27635 214 aaKnown RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 PMLP29590 882 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 NSG1P42857 185 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 PRLHRP49683 370 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 EIF3BP55884 814 aaKnown RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 ARHGAP8P85298 464 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 SLC14A1Q13336 389 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 EFTUD2Q15029 972 aaKnown RBP eCLIP15.61■□□□□ 0.092e-6■■■■■ 32.8
COPS3-207ENST00000477299 BRD3Q15059 726 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 ELOCQ15369 112 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 SEPT7Q16181 437 aaKnown RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 INSCQ1MX18 579 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 ZNF658BQ4V348 819 aaPredicted RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 BCL7AQ4VC05 210 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 LYPLAL1Q5VWZ2 237 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 MRNIPQ6NTE8 343 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 PACS1Q6VY07 963 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 CERS6Q6ZMG9 384 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 C3orf62Q6ZUJ4 267 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 SDCCAG8Q86SQ7 713 aaPredicted RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 CCNJLQ8IV13 435 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 FSTL5Q8N475 847 aaPredicted RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 OR4C6Q8NH72 309 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 GSDMBQ8TAX9 411 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 NETO1Q8TDF5 533 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.61■□□□□ 0.09
COPS3-207ENST00000477299 FAM136AQ96C01 138 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 CDC42EP4Q9H3Q1 356 aaKnown RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 MTRF1LQ9UGC7 380 aaKnown RBP15.61■□□□□ 0.09
COPS3-207ENST00000477299 PCOLCE2Q9UKZ9 415 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 PSMD13Q9UNM6 376 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 GPR34Q9UPC5 381 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 CSNK1G3Q9Y6M4 447 aa15.61■□□□□ 0.09
COPS3-207ENST00000477299 ANKRD12Q6UB98 2062 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 COL5A1P20908 1838 aaPredicted RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 TCRBV9S1A1TA0A576 114 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 DCDC2BA2VCK2 349 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 B4DGG1 531 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 CFAP99D6REC4 459 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 SLC30A4O14863 429 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 YKT6O15498 198 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 NOBOXO60393 691 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 NIPSNAP2O75323 286 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 RALBP11234 206 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 TTPAP49638 278 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 CSE1LP55060 971 aaKnown RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 VSNL1P62760 191 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 ILF3Q12906 894 aaKnown RBP eCLIP15.6■□□□□ 0.09
COPS3-207ENST00000477299 DNAJC3Q13217 504 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 SUZ12Q15022 739 aaKnown RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 CCNI2Q6ZMN8 369 aaPredicted RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 AMZ2Q86W34 360 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 GKN2Q86XP6 184 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 SLC35F3Q8IY50 421 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 CFAP206Q8IYR0 622 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 NAGSQ8N159 534 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 C2CD4AQ8NCU7 369 aaPredicted RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 ACVR1CQ8NER5 493 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 UHMK1Q8TAS1 419 aaKnown RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 BAHD1Q8TBE0 780 aaPredicted RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 APOLD1Q96LR9 279 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 GSDMCQ9BYG8 508 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 ZCCHC2Q9C0B9 1178 aaKnown RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 PHACTR1Q9C0D0 580 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 DPEP2Q9H4A9 486 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 OSGEPL1Q9H4B0 414 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 NLGN3Q9NZ94 848 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 DOLKQ9UPQ8 538 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 WDR37Q9Y2I8 494 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 MED16Q9Y2X0 877 aa15.6■□□□□ 0.09
COPS3-207ENST00000477299 CNOT1A5YKK6 2376 aaKnown RBP15.6■□□□□ 0.09
COPS3-207ENST00000477299 A6NCN8 305 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 NEMP2A6NFY4 417 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 MGAT4DA6NG13 374 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 GPR89AB7ZAQ6 455 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 PRMT5O14744 637 aaPredicted RBP15.59■□□□□ 0.09
COPS3-207ENST00000477299 FAM155BO75949 473 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 TRIM16O95361 564 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 GPR89BP0CG08 455 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 BRAFP15056 766 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 PDHA2P29803 388 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 GRK6P43250 576 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 PREPP48147 710 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 LEPRP48357 1165 aaKnown RBP15.59■□□□□ 0.09
COPS3-207ENST00000477299 MAZP56270 477 aaKnown RBP15.59■□□□□ 0.09
COPS3-207ENST00000477299 TIAL1Q01085 375 aaKnown RBP eCLIP15.59■□□□□ 0.09
COPS3-207ENST00000477299 MGAT5Q09328 741 aa15.59■□□□□ 0.09
COPS3-207ENST00000477299 FRG1Q14331 258 aaKnown RBP15.59■□□□□ 0.09
COPS3-207ENST00000477299 AARS2Q5JTZ9 985 aaKnown RBP15.59■□□□□ 0.09
COPS3-207ENST00000477299 RBM20Q5T481 1227 aaKnown RBP15.59■□□□□ 0.09
COPS3-207ENST00000477299 CNTN4Q8IWV2 1026 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms