RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 NUMA1Q14980 2115 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 PSMD12O00232 456 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-221ENST00000477203 FZD6O60353 706 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 RNASEH1O60930 286 aaKnown RBP13.23□□□□□ -0.29
HDAC7-221ENST00000477203 MOSPD3O75425 235 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 WISP3O95389 354 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-221ENST00000477203 CA3P07451 260 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 ALDOCP09972 364 aaKnown RBP13.23□□□□□ -0.29
HDAC7-221ENST00000477203 ZNF24P17028 368 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 LHCGRP22888 699 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 AKT1P31749 480 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 CLCN4P51793 760 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 ADARP55265 1226 aaKnown RBP13.23□□□□□ -0.29
HDAC7-221ENST00000477203 AP1S1P61966 158 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 MRPS22P82650 360 aaKnown RBP13.23□□□□□ -0.29
HDAC7-221ENST00000477203 NFATC2Q13469 925 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 ATP13A5Q4VNC0 1218 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 ANKS6Q68DC2 871 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 C22orf39Q6P5X5 142 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 CRTC1Q6UUV9 634 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 AFAP1L2Q8N4X5 818 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 HMGCLL1Q8TB92 370 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 KIAA1191Q96A73 305 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 MTFMTQ96DP5 389 aaKnown RBP13.23□□□□□ -0.29
HDAC7-221ENST00000477203 CEP295NLQ96MC4 621 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 RAD9AQ99638 391 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 TUBB1Q9H4B7 451 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 ADAMTS6Q9UKP5 1117 aa13.23□□□□□ -0.29
HDAC7-221ENST00000477203 MRPS23Q9Y3D9 190 aaKnown RBP13.23□□□□□ -0.29
HDAC7-221ENST00000477203 DNAJA2O60884 412 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 KERAO60938 352 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 TSPAN12O95859 305 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 PABPC1P11940 636 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 HLA-EP13747 358 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 HGFP14210 728 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 PTPN2P17706 415 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ACTR3P61158 418 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 SNRPD1P62314 119 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 CACNG1Q06432 222 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 CAMK1Q14012 370 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 BOP1Q14137 746 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 MYLK3Q32MK0 819 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 CYP2R1Q6VVX0 501 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 IRF7Q92985 503 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ACDQ96AP0 544 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ITM2BQ9Y287 266 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 COMMD3-BMI1R4GMX3 469 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 GAPDHSO14556 408 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 GIPC1O14908 333 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 CCNT2O60583 730 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 LMNAP02545 664 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ANPEPP15144 967 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ITGALP20701 1170 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 RAP1GDS1P52306 607 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 METAP1P53582 386 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 CCNIQ14094 377 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 AAK1Q2M2I8 961 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 VPS26BQ4G0F5 336 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ADGRD2Q7Z7M1 963 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 SYVN1Q86TM6 617 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ST13P4Q8IZP2 240 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 HSPBAP1Q96EW2 488 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 SUV39H2Q9H5I1 410 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 NOL11Q9H8H0 719 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 B4GALT6Q9UBX8 382 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 SPEGQ15772 3267 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 MYO15AQ9UKN7 3530 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 LINC01553A4QN01 128 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 SLCO1B7G3V0H7 640 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 PFDN6O15212 129 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 PENKP01210 267 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 YBX1P67809 324 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 CAPRIN1Q14444 709 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 TGFBIQ15582 683 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 PHKG1Q16816 387 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 KCTD21Q4G0X4 260 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ARSIQ5FYB1 569 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 NET1Q7Z628 596 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 IFNEQ86WN2 208 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 FBXW8Q8N3Y1 598 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 FOXJ1Q92949 421 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 DERL2Q9GZP9 239 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 EBF3Q9H4W6 596 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 PFDN4Q9NQP4 134 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 ZNHIT2Q9UHR6 403 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 SLC25A13Q9UJS0 675 aa13.22□□□□□ -0.29
HDAC7-221ENST00000477203 OAS3Q9Y6K5 1087 aaKnown RBP13.22□□□□□ -0.29
HDAC7-221ENST00000477203 OR2AG2A6NM03 316 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 GGT5P36269 586 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 RECQLP46063 649 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-221ENST00000477203 MS4A2Q01362 244 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 CEACAM7Q14002 265 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 TRMT5Q32P41 509 aaKnown RBP13.21□□□□□ -0.29
HDAC7-221ENST00000477203 METTL21CQ5VZV1 264 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 CLYBLQ8N0X4 340 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 VPS33AQ96AX1 596 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 RTKNQ9BST9 563 aa13.21□□□□□ -0.29
HDAC7-221ENST00000477203 TFB2MQ9H5Q4 396 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms